BLASTX nr result

ID: Angelica23_contig00025002 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00025002
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit ...   173   1e-41
gb|AAA76862.1| unknown protein [Solanum chilense]                     171   4e-41
ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putati...   168   5e-40
ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit ...   166   2e-39
ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit ...   166   2e-39

>ref|XP_002263731.1| PREDICTED: COP9 signalosome complex subunit 3 [Vitis vinifera]
           gi|296090247|emb|CBI40066.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score =  173 bits (438), Expect = 1e-41
 Identities = 85/117 (72%), Positives = 99/117 (84%)
 Frame = -2

Query: 352 KYILVSLLHLGQFIPDFPKYTSPVAQKNLKTFAQPYLELALTYGTGKLAEVGRCVQKNQE 173
           KYILVSL+H GQF   FPKYTS VAQ+NLK F+QPYL+LA +Y +GK++E  +C+Q N+E
Sbjct: 221 KYILVSLIHNGQFSTTFPKYTSSVAQRNLKNFSQPYLDLANSYSSGKISEPEKCIQTNRE 280

Query: 172 RFEKDNNFGLVRQVISSTYKRNILRLTQTYLTLSLQDIANRVQLNSAKEAEMHVLQM 2
           +FE D N GLV+QV+SS YKRNI RLTQTYLTLSLQDIAN VQLNS KEAEMHVLQM
Sbjct: 281 KFEADKNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQM 337


>gb|AAA76862.1| unknown protein [Solanum chilense]
          Length = 250

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/117 (72%), Positives = 98/117 (83%)
 Frame = -2

Query: 352 KYILVSLLHLGQFIPDFPKYTSPVAQKNLKTFAQPYLELALTYGTGKLAEVGRCVQKNQE 173
           KYILVSL+HLGQF   FPKYTS VAQ+NLK F+QPYLEL+ +YGTG+++E+   VQ N+E
Sbjct: 37  KYILVSLIHLGQFSTSFPKYTSSVAQRNLKNFSQPYLELSNSYGTGRISELETFVQTNKE 96

Query: 172 RFEKDNNFGLVRQVISSTYKRNILRLTQTYLTLSLQDIANRVQLNSAKEAEMHVLQM 2
           +FE DNN GLV QV+SS YKRNI RLTQTYLTLSLQDIAN VQL   K+AEMHVLQM
Sbjct: 97  KFESDNNLGLVMQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLRGPKQAEMHVLQM 153


>ref|XP_002509556.1| 26S proteasome regulatory subunit S3, putative [Ricinus communis]
           gi|223549455|gb|EEF50943.1| 26S proteasome regulatory
           subunit S3, putative [Ricinus communis]
          Length = 427

 Score =  168 bits (425), Expect = 5e-40
 Identities = 84/117 (71%), Positives = 94/117 (80%)
 Frame = -2

Query: 352 KYILVSLLHLGQFIPDFPKYTSPVAQKNLKTFAQPYLELALTYGTGKLAEVGRCVQKNQE 173
           KYIL SL+H GQF    PKY S  AQ+NLK F QPY+ELA +Y TGK+AE+   VQ N+E
Sbjct: 224 KYILASLIHQGQFSTSLPKYASSAAQRNLKNFCQPYIELANSYSTGKIAELETYVQTNRE 283

Query: 172 RFEKDNNFGLVRQVISSTYKRNILRLTQTYLTLSLQDIANRVQLNSAKEAEMHVLQM 2
           +FE DNN GLV+QV+SS YKRNI RLTQTYLTLSLQDIAN VQLNS KEAEMHVLQM
Sbjct: 284 KFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQM 340


>ref|XP_003524625.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 2
           [Glycine max]
          Length = 423

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/117 (71%), Positives = 95/117 (81%)
 Frame = -2

Query: 352 KYILVSLLHLGQFIPDFPKYTSPVAQKNLKTFAQPYLELALTYGTGKLAEVGRCVQKNQE 173
           KYILVSL+  GQF    PKY+S  AQ+NLK F QPY+ELA +YGTGK+AE+   V+ N E
Sbjct: 221 KYILVSLIRHGQFSTSLPKYSSSTAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAE 280

Query: 172 RFEKDNNFGLVRQVISSTYKRNILRLTQTYLTLSLQDIANRVQLNSAKEAEMHVLQM 2
           +FE DNN GLV+QV+SS YKRNI RLTQTYLTLSLQDIAN VQLNS KEAEMHVLQM
Sbjct: 281 KFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQM 337


>ref|XP_003524624.1| PREDICTED: COP9 signalosome complex subunit 3-like isoform 1
           [Glycine max]
          Length = 423

 Score =  166 bits (420), Expect = 2e-39
 Identities = 84/117 (71%), Positives = 95/117 (81%)
 Frame = -2

Query: 352 KYILVSLLHLGQFIPDFPKYTSPVAQKNLKTFAQPYLELALTYGTGKLAEVGRCVQKNQE 173
           KYILVSL+  GQF    PKY+S  AQ+NLK F QPY+ELA +YGTGK+AE+   V+ N E
Sbjct: 221 KYILVSLIRHGQFSTSLPKYSSSTAQRNLKNFCQPYVELANSYGTGKIAELEAYVKANAE 280

Query: 172 RFEKDNNFGLVRQVISSTYKRNILRLTQTYLTLSLQDIANRVQLNSAKEAEMHVLQM 2
           +FE DNN GLV+QV+SS YKRNI RLTQTYLTLSLQDIAN VQLNS KEAEMHVLQM
Sbjct: 281 KFESDNNLGLVKQVVSSMYKRNIQRLTQTYLTLSLQDIANTVQLNSPKEAEMHVLQM 337


Top