BLASTX nr result

ID: Angelica23_contig00024919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024919
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [...   127   7e-28
emb|CBI36837.3| unnamed protein product [Vitis vinifera]              126   2e-27
ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2...   126   2e-27
emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]   125   3e-27
ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2...   124   1e-26

>ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
           gi|223537618|gb|EEF39241.1| DNA mismatch repair protein
           pms2, putative [Ricinus communis]
          Length = 924

 Score =  127 bits (320), Expect = 7e-28
 Identities = 66/114 (57%), Positives = 85/114 (74%), Gaps = 3/114 (2%)
 Frame = +1

Query: 1   VDMPKVGKLVNELYKGANSRQFPIAILDFTLPSRACDVNVTPDKRKIFFSEENAIFDSLR 180
           VDMPKV KLVNELY+GANSRQ+PIAI++F +P+RACDVNVTPDKRKIFFS+E +I  +LR
Sbjct: 274 VDMPKVTKLVNELYRGANSRQYPIAIMNFIVPTRACDVNVTPDKRKIFFSDETSILHALR 333

Query: 181 EALQNIYSPGHVSFSVNRCENLSKCDDFSKHA---ECSQLSPEKFSMKCSDSKE 333
           E LQNIYSP + S+SVN+ E   K    S+     E S +  ++ S   +D++E
Sbjct: 334 EGLQNIYSPSNASYSVNKFEERIKAASNSQSCSPHEKSLVLSKQLSAVSNDAEE 387


>emb|CBI36837.3| unnamed protein product [Vitis vinifera]
          Length = 854

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/90 (70%), Positives = 75/90 (83%)
 Frame = +1

Query: 1   VDMPKVGKLVNELYKGANSRQFPIAILDFTLPSRACDVNVTPDKRKIFFSEENAIFDSLR 180
           VDMPKVGKLVNELYKGANSRQ+PIAI++FT+P+RA DVNVTPDKRKIFFS+E +I  SLR
Sbjct: 277 VDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLR 336

Query: 181 EALQNIYSPGHVSFSVNRCENLSKCDDFSK 270
           E L+ IYSP   S+SVNR E  ++  D S+
Sbjct: 337 EGLEKIYSPSLTSYSVNRFEEPTEETDNSE 366


>ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
          Length = 937

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/90 (70%), Positives = 75/90 (83%)
 Frame = +1

Query: 1   VDMPKVGKLVNELYKGANSRQFPIAILDFTLPSRACDVNVTPDKRKIFFSEENAIFDSLR 180
           VDMPKVGKLVNELYKGANSRQ+PIAI++FT+P+RA DVNVTPDKRKIFFS+E +I  SLR
Sbjct: 277 VDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLR 336

Query: 181 EALQNIYSPGHVSFSVNRCENLSKCDDFSK 270
           E L+ IYSP   S+SVNR E  ++  D S+
Sbjct: 337 EGLEKIYSPSLTSYSVNRFEEPTEETDNSE 366


>emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
          Length = 3804

 Score =  125 bits (315), Expect = 3e-27
 Identities = 61/80 (76%), Positives = 70/80 (87%)
 Frame = +1

Query: 1    VDMPKVGKLVNELYKGANSRQFPIAILDFTLPSRACDVNVTPDKRKIFFSEENAIFDSLR 180
            VDMPKVGKLVNELYKGANSRQ+PIAI++FT+P+RA DVNVTPDKRKIFFS+E +I  SLR
Sbjct: 2976 VDMPKVGKLVNELYKGANSRQYPIAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLR 3035

Query: 181  EALQNIYSPGHVSFSVNRCE 240
            E L+ IYSP   S+SVNR E
Sbjct: 3036 EGLEKIYSPSLTSYSVNRFE 3055


>ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1|
           predicted protein [Populus trichocarpa]
          Length = 915

 Score =  124 bits (310), Expect = 1e-26
 Identities = 65/114 (57%), Positives = 85/114 (74%), Gaps = 3/114 (2%)
 Frame = +1

Query: 1   VDMPKVGKLVNELYKGANSRQFPIAILDFTLPSRACDVNVTPDKRKIFFSEENAIFDSLR 180
           VDMPKV KLVNELYKGANSRQ+PIAI++FT+P+ ACDVNVTPDKRKIFFS+E++I  +LR
Sbjct: 273 VDMPKVSKLVNELYKGANSRQYPIAIMNFTIPTTACDVNVTPDKRKIFFSDESSILLALR 332

Query: 181 EALQNIYSPGHVSFSVNRCENLSKCDDFSK---HAECSQLSPEKFSMKCSDSKE 333
           E L+  YS  +  +SVN+ EN +K  D S+     E S +  ++ S   +DS+E
Sbjct: 333 EGLEKNYSSSNSCYSVNKFENHAKAADSSQLCSPREKSNMLSKQSSANGNDSEE 386


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