BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024894
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]                111   7e-23
gb|AAL35396.1| Opie2a pol [Zea mays] gi|168251075|gb|ACA21858.1|...   109   2e-22
gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]           108   4e-22
gb|AEJ07899.1| Opie3 putative pol protein [Zea mays subsp. mexic...   108   4e-22
gb|ABF67946.1| putative Opie4 pol protein [Zea mays]                  108   4e-22

>gb|AAN40030.1| putative gag-pol polyprotein [Zea mays]
          Length = 2319

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/103 (51%), Positives = 70/103 (67%)
 Frame = -1

Query: 309  QKGKSKKATHRSTDTSSITEPLQLLHMDLFGPVNVMTISRKKYALVIVDDFSKFTWVLFL 130
            Q GK     H+S +  +   PL+LLHMDLFGPV  ++I   KY LVIVDDFS+FTWV FL
Sbjct: 906  QAGKQHGVPHQSKNVVTTKRPLELLHMDLFGPVAYISIGGSKYGLVIVDDFSRFTWVFFL 965

Query: 129  YSKDETPEVLIKHIKVIEVEFNLPVRAIRSDNGTEFKNVTLDD 1
              K ET E+L K ++  + EF L ++ +RSDNGTEFKN  +++
Sbjct: 966  SDKGETQEILKKFMRRAQNEFELKIKKVRSDNGTEFKNTGVEE 1008


>gb|AAL35396.1| Opie2a pol [Zea mays] gi|168251075|gb|ACA21858.1| Opie2a pol
           protein [Zea mays]
          Length = 1048

 Score =  109 bits (273), Expect = 2e-22
 Identities = 50/103 (48%), Positives = 72/103 (69%)
 Frame = -1

Query: 309 QKGKSKKATHRSTDTSSITEPLQLLHMDLFGPVNVMTISRKKYALVIVDDFSKFTWVLFL 130
           Q GK  + +H + +  + + PL++LHMDLFGPV  ++I   KY LVIVDDFS+FTWV FL
Sbjct: 163 QAGKQVRGSHHTKNVMTTSRPLEMLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFL 222

Query: 129 YSKDETPEVLIKHIKVIEVEFNLPVRAIRSDNGTEFKNVTLDD 1
             K ET   L ++++  + EF L V+ IRSDNG+EFKN+ +++
Sbjct: 223 QDKSETQGTLKRYLRRAQNEFELKVKKIRSDNGSEFKNLQVEE 265


>gb|AEJ07931.1| Opie3 pol protein [Zea mays subsp. mexicana]
          Length = 1048

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/103 (50%), Positives = 69/103 (66%)
 Frame = -1

Query: 309 QKGKSKKATHRSTDTSSITEPLQLLHMDLFGPVNVMTISRKKYALVIVDDFSKFTWVLFL 130
           Q GK     H S +  + + PL+LLHMDLFGPV  ++I   KY LVIVDDFS+FTWV FL
Sbjct: 163 QAGKQVGGAHHSKNVMTTSRPLELLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFL 222

Query: 129 YSKDETPEVLIKHIKVIEVEFNLPVRAIRSDNGTEFKNVTLDD 1
             K ET   L + ++  + EF L V+ IRSDNG+EFKN+ +++
Sbjct: 223 QDKSETQGTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEE 265


>gb|AEJ07899.1| Opie3 putative pol protein [Zea mays subsp. mexicana]
          Length = 1048

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/103 (50%), Positives = 69/103 (66%)
 Frame = -1

Query: 309 QKGKSKKATHRSTDTSSITEPLQLLHMDLFGPVNVMTISRKKYALVIVDDFSKFTWVLFL 130
           Q GK     H S +  + + PL+LLHMDLFGPV  ++I   KY LVIVDDFS+FTWV FL
Sbjct: 163 QAGKQVGGAHHSKNVMTTSRPLELLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFL 222

Query: 129 YSKDETPEVLIKHIKVIEVEFNLPVRAIRSDNGTEFKNVTLDD 1
             K ET   L + ++  + EF L V+ IRSDNG+EFKN+ +++
Sbjct: 223 QDKSETQGTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEE 265


>gb|ABF67946.1| putative Opie4 pol protein [Zea mays]
          Length = 1068

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/103 (50%), Positives = 69/103 (66%)
 Frame = -1

Query: 309 QKGKSKKATHRSTDTSSITEPLQLLHMDLFGPVNVMTISRKKYALVIVDDFSKFTWVLFL 130
           Q GK     H S +  + + PL+LLHMDLFGPV  ++I   KY LVIVDDFS+FTWV FL
Sbjct: 183 QAGKQVGGAHHSKNVMTTSRPLELLHMDLFGPVAYLSIGGSKYGLVIVDDFSRFTWVFFL 242

Query: 129 YSKDETPEVLIKHIKVIEVEFNLPVRAIRSDNGTEFKNVTLDD 1
             K ET   L + ++  + EF L V+ IRSDNG+EFKN+ +++
Sbjct: 243 QDKSETQGTLKRFLRRAQNEFELKVKKIRSDNGSEFKNLQVEE 285