BLASTX nr result

ID: Angelica23_contig00024888 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024888
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinu...   380   e-103
ref|XP_002273744.2| PREDICTED: glutamate receptor 3.4-like [Viti...   377   e-102
emb|CBI28943.3| unnamed protein product [Vitis vinifera]              377   e-102
emb|CAN66741.1| hypothetical protein VITISV_021644 [Vitis vinifera]   377   e-102
ref|XP_002321123.1| glutamate-gated kainate-type ion channel rec...   362   8e-98

>ref|XP_002524179.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223536548|gb|EEF38194.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 938

 Score =  380 bits (977), Expect = e-103
 Identities = 190/265 (71%), Positives = 221/265 (83%), Gaps = 2/265 (0%)
 Frame = -1

Query: 791 LLRTSVCAVILSICVLTQVIDVTGETNG--SYSRPSVLNFGALFTLNSVIGRSVKPAIVA 618
           + R  +  ++ S  +  +V+   G  +   S SRPSV+N GALFT+NSVIGR+ KPAI A
Sbjct: 1   MARIQLLLIVSSAFIPMEVLCKVGNASVTVSSSRPSVVNIGALFTINSVIGRAAKPAIAA 60

Query: 617 AIDDVNSDSSILPGTKLNMILHDTNCSGFLGTIGALQLMENDVVAVIGPQSSGIAHVISH 438
           A+ DVNSDSSILPGTKLN+I+ DTNCSGF+GTI AL+LME+DVV  IGPQSSGIAHVISH
Sbjct: 61  AVGDVNSDSSILPGTKLNLIVQDTNCSGFIGTIEALKLMEDDVVVAIGPQSSGIAHVISH 120

Query: 437 VVNELHVPLLSFGATDPTLSALQFPYFLRTTHSDYSQMHAIADLVQHYRWNEVIAIFVDD 258
           VVNELHVPLLSFGATDP+LSALQ+PYFLR+T SDY QM A+ADLV ++ W EVIAIFVDD
Sbjct: 121 VVNELHVPLLSFGATDPSLSALQYPYFLRSTQSDYYQMFAVADLVSYFDWREVIAIFVDD 180

Query: 257 DYGRNGISALGDALAEKRAKISYKAAITPGASRTDINNLLAGVNLMESRVYVVHVNPDSG 78
           DYGRNGIS LGDAL +KR KISYKAA TPGA ++ IN+LL GVNLMESRVYVVHVNPDSG
Sbjct: 181 DYGRNGISVLGDALVKKRCKISYKAAFTPGAPKSAINDLLVGVNLMESRVYVVHVNPDSG 240

Query: 77  LTVFAEAEKLGMMASGYVWIATDWL 3
           L +F+ A+ LGMM+ GYVWIATDWL
Sbjct: 241 LQIFSVAQSLGMMSKGYVWIATDWL 265


>ref|XP_002273744.2| PREDICTED: glutamate receptor 3.4-like [Vitis vinifera]
          Length = 911

 Score =  377 bits (968), Expect = e-102
 Identities = 186/255 (72%), Positives = 217/255 (85%)
 Frame = -1

Query: 767 VILSICVLTQVIDVTGETNGSYSRPSVLNFGALFTLNSVIGRSVKPAIVAAIDDVNSDSS 588
           ++L  C+   ++      + S S  +V+N GA+FTLNS IGR+ +PAI+AAIDDVNSDSS
Sbjct: 5   LLLIFCIWVPILGRAQNASVSSSAANVVNIGAVFTLNSFIGRAAQPAILAAIDDVNSDSS 64

Query: 587 ILPGTKLNMILHDTNCSGFLGTIGALQLMENDVVAVIGPQSSGIAHVISHVVNELHVPLL 408
           IL G KLN+I  DTNCSGFLGT+ ALQLME DVVA+IGPQSSGIAHV+SHVVNE H+PLL
Sbjct: 65  ILEGRKLNVIFQDTNCSGFLGTVEALQLMEKDVVAIIGPQSSGIAHVMSHVVNEFHIPLL 124

Query: 407 SFGATDPTLSALQFPYFLRTTHSDYSQMHAIADLVQHYRWNEVIAIFVDDDYGRNGISAL 228
           SFGATDPTLSALQFPYFLRTT SDY QM+AIADLV  + W EVIAIFVDDDYGRNGIS L
Sbjct: 125 SFGATDPTLSALQFPYFLRTTQSDYYQMYAIADLVDFFEWREVIAIFVDDDYGRNGISVL 184

Query: 227 GDALAEKRAKISYKAAITPGASRTDINNLLAGVNLMESRVYVVHVNPDSGLTVFAEAEKL 48
           GDALA+KRAKISYKAA TPGA++ +I++LLAGVNLMESRV+VVHVNPDSGL +F+ A+ L
Sbjct: 185 GDALAKKRAKISYKAAFTPGATKNEISDLLAGVNLMESRVFVVHVNPDSGLYIFSVAKVL 244

Query: 47  GMMASGYVWIATDWL 3
           GM+ +GYVWIATDWL
Sbjct: 245 GMLNNGYVWIATDWL 259


>emb|CBI28943.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score =  377 bits (968), Expect = e-102
 Identities = 186/255 (72%), Positives = 217/255 (85%)
 Frame = -1

Query: 767 VILSICVLTQVIDVTGETNGSYSRPSVLNFGALFTLNSVIGRSVKPAIVAAIDDVNSDSS 588
           ++L  C+   ++      + S S  +V+N GA+FTLNS IGR+ +PAI+AAIDDVNSDSS
Sbjct: 18  LLLIFCIWVPILGRAQNASVSSSAANVVNIGAVFTLNSFIGRAAQPAILAAIDDVNSDSS 77

Query: 587 ILPGTKLNMILHDTNCSGFLGTIGALQLMENDVVAVIGPQSSGIAHVISHVVNELHVPLL 408
           IL G KLN+I  DTNCSGFLGT+ ALQLME DVVA+IGPQSSGIAHV+SHVVNE H+PLL
Sbjct: 78  ILEGRKLNVIFQDTNCSGFLGTVEALQLMEKDVVAIIGPQSSGIAHVMSHVVNEFHIPLL 137

Query: 407 SFGATDPTLSALQFPYFLRTTHSDYSQMHAIADLVQHYRWNEVIAIFVDDDYGRNGISAL 228
           SFGATDPTLSALQFPYFLRTT SDY QM+AIADLV  + W EVIAIFVDDDYGRNGIS L
Sbjct: 138 SFGATDPTLSALQFPYFLRTTQSDYYQMYAIADLVDFFEWREVIAIFVDDDYGRNGISVL 197

Query: 227 GDALAEKRAKISYKAAITPGASRTDINNLLAGVNLMESRVYVVHVNPDSGLTVFAEAEKL 48
           GDALA+KRAKISYKAA TPGA++ +I++LLAGVNLMESRV+VVHVNPDSGL +F+ A+ L
Sbjct: 198 GDALAKKRAKISYKAAFTPGATKNEISDLLAGVNLMESRVFVVHVNPDSGLYIFSVAKVL 257

Query: 47  GMMASGYVWIATDWL 3
           GM+ +GYVWIATDWL
Sbjct: 258 GMLNNGYVWIATDWL 272


>emb|CAN66741.1| hypothetical protein VITISV_021644 [Vitis vinifera]
          Length = 949

 Score =  377 bits (968), Expect = e-102
 Identities = 186/255 (72%), Positives = 217/255 (85%)
 Frame = -1

Query: 767 VILSICVLTQVIDVTGETNGSYSRPSVLNFGALFTLNSVIGRSVKPAIVAAIDDVNSDSS 588
           ++L  C+   ++      + S S  +V+N GA+FTLNS IGR+ +PAI+AAIDDVNSDSS
Sbjct: 18  LLLIFCIWVPILGRAQNASVSSSAANVVNIGAVFTLNSFIGRAAQPAILAAIDDVNSDSS 77

Query: 587 ILPGTKLNMILHDTNCSGFLGTIGALQLMENDVVAVIGPQSSGIAHVISHVVNELHVPLL 408
           IL G KLN+I  DTNCSGFLGT+ ALQLME DVVA+IGPQSSGIAHV+SHVVNE H+PLL
Sbjct: 78  ILEGRKLNVIFQDTNCSGFLGTVEALQLMEKDVVAIIGPQSSGIAHVMSHVVNEFHIPLL 137

Query: 407 SFGATDPTLSALQFPYFLRTTHSDYSQMHAIADLVQHYRWNEVIAIFVDDDYGRNGISAL 228
           SFGATDPTLSALQFPYFLRTT SDY QM+AIADLV  + W EVIAIFVDDDYGRNGIS L
Sbjct: 138 SFGATDPTLSALQFPYFLRTTQSDYYQMYAIADLVDFFEWREVIAIFVDDDYGRNGISVL 197

Query: 227 GDALAEKRAKISYKAAITPGASRTDINNLLAGVNLMESRVYVVHVNPDSGLTVFAEAEKL 48
           GDALA+KRAKISYKAA TPGA++ +I++LLAGVNLMESRV+VVHVNPDSGL +F+ A+ L
Sbjct: 198 GDALAKKRAKISYKAAFTPGATKNEISDLLAGVNLMESRVFVVHVNPDSGLHIFSVAKVL 257

Query: 47  GMMASGYVWIATDWL 3
           GM+ +GYVWIATDWL
Sbjct: 258 GMLNNGYVWIATDWL 272


>ref|XP_002321123.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222861896|gb|EEE99438.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 927

 Score =  362 bits (929), Expect = 8e-98
 Identities = 179/241 (74%), Positives = 206/241 (85%)
 Frame = -1

Query: 725 TGETNGSYSRPSVLNFGALFTLNSVIGRSVKPAIVAAIDDVNSDSSILPGTKLNMILHDT 546
           T  ++ S  RPSV N G+LFT +SVIGR+  PAI AA+DDVNSD ++LPGT+LN+I H+T
Sbjct: 15  TSVSSSSSPRPSVANIGSLFTFDSVIGRAAGPAIAAAVDDVNSDPTVLPGTRLNLISHNT 74

Query: 545 NCSGFLGTIGALQLMENDVVAVIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSALQF 366
           NCSGFLGT+ ALQLMEN VVAVIGPQSSGIAH+ISHVVNELHVPLLSF ATDP+LSALQ+
Sbjct: 75  NCSGFLGTVEALQLMENRVVAVIGPQSSGIAHIISHVVNELHVPLLSFAATDPSLSALQY 134

Query: 365 PYFLRTTHSDYSQMHAIADLVQHYRWNEVIAIFVDDDYGRNGISALGDALAEKRAKISYK 186
           PYFLRTT +DY QM+AIADLV  Y W EVIAIFVDDD GRNGIS LGDALA+KRAKI+YK
Sbjct: 135 PYFLRTTQNDYFQMYAIADLVTSYGWREVIAIFVDDDCGRNGISILGDALAKKRAKIAYK 194

Query: 185 AAITPGASRTDINNLLAGVNLMESRVYVVHVNPDSGLTVFAEAEKLGMMASGYVWIATDW 6
           AA+TPG  R+ I++LL  VN MESRVYVVHVNPDSGL++F+ A+ L MM  GYVWIATDW
Sbjct: 195 AALTPGVPRSQISDLLLEVNQMESRVYVVHVNPDSGLSIFSVAKSLHMMTKGYVWIATDW 254

Query: 5   L 3
           L
Sbjct: 255 L 255


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