BLASTX nr result
ID: Angelica23_contig00024887
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica23_contig00024887 (330 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519896.1| Surfeit locus protein, putative [Ricinus com... 81 1e-13 ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II tra... 76 2e-12 emb|CAN83083.1| hypothetical protein VITISV_001331 [Vitis vinifera] 76 2e-12 ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|2... 76 3e-12 ref|XP_003595880.1| Mediator of RNA polymerase II transcription ... 76 3e-12 >ref|XP_002519896.1| Surfeit locus protein, putative [Ricinus communis] gi|223540942|gb|EEF42500.1| Surfeit locus protein, putative [Ricinus communis] Length = 150 Score = 80.9 bits (198), Expect = 1e-13 Identities = 41/62 (66%), Positives = 46/62 (74%) Frame = -1 Query: 330 VSELKQTAIFSGFATLNDHVKQRT*ELNQLENKTEGTLAGIGENDVDSITDLESEYYSSV 151 VSELKQTAIFSGFA+LNDHV QR E NQ E +T+G LA +GE S+ DLES YYSS Sbjct: 82 VSELKQTAIFSGFASLNDHVDQRIVEFNQQEEETDGILAKVGEEAAASLKDLESHYYSSA 141 Query: 150 RR 145 R Sbjct: 142 HR 143 >ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II transcription subunit 22 [Vitis vinifera] gi|297736089|emb|CBI24127.3| unnamed protein product [Vitis vinifera] Length = 150 Score = 76.3 bits (186), Expect = 2e-12 Identities = 40/62 (64%), Positives = 45/62 (72%) Frame = -1 Query: 330 VSELKQTAIFSGFATLNDHVKQRT*ELNQLENKTEGTLAGIGENDVDSITDLESEYYSSV 151 VSELKQTAIFSGFA+LNDHV QR E NQ KT+ LA IGE S+ +LES YYSS Sbjct: 82 VSELKQTAIFSGFASLNDHVDQREAEFNQQAEKTDHLLARIGEEAAASLKELESHYYSSA 141 Query: 150 RR 145 +R Sbjct: 142 QR 143 >emb|CAN83083.1| hypothetical protein VITISV_001331 [Vitis vinifera] Length = 180 Score = 76.3 bits (186), Expect = 2e-12 Identities = 40/62 (64%), Positives = 45/62 (72%) Frame = -1 Query: 330 VSELKQTAIFSGFATLNDHVKQRT*ELNQLENKTEGTLAGIGENDVDSITDLESEYYSSV 151 VSELKQTAIFSGFA+LNDHV QR E NQ KT+ LA IGE S+ +LES YYSS Sbjct: 112 VSELKQTAIFSGFASLNDHVDQREAEFNQQAEKTDHLLARIGEEAAASLKELESHYYSSA 171 Query: 150 RR 145 +R Sbjct: 172 QR 173 >ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|222852038|gb|EEE89585.1| predicted protein [Populus trichocarpa] Length = 158 Score = 75.9 bits (185), Expect = 3e-12 Identities = 39/62 (62%), Positives = 45/62 (72%) Frame = -1 Query: 330 VSELKQTAIFSGFATLNDHVKQRT*ELNQLENKTEGTLAGIGENDVDSITDLESEYYSSV 151 VSELKQTAIFSGFA+LNDHV QR E QL KT+ LA IGE S+ +LE+ YYSS Sbjct: 90 VSELKQTAIFSGFASLNDHVDQRIGEFTQLAEKTDSMLARIGEEAAASLKELETHYYSSA 149 Query: 150 RR 145 +R Sbjct: 150 QR 151 >ref|XP_003595880.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] gi|355484928|gb|AES66131.1| Mediator of RNA polymerase II transcription subunit [Medicago truncatula] Length = 150 Score = 75.9 bits (185), Expect = 3e-12 Identities = 39/62 (62%), Positives = 47/62 (75%) Frame = -1 Query: 330 VSELKQTAIFSGFATLNDHVKQRT*ELNQLENKTEGTLAGIGENDVDSITDLESEYYSSV 151 VSELKQTAIFSGFA+LNDHV+QR E NQL KT+ TL+ IGE S+ +LES Y SS Sbjct: 82 VSELKQTAIFSGFASLNDHVEQRRLEFNQLAEKTDHTLSTIGEEAAASLKELESHYSSSA 141 Query: 150 RR 145 ++ Sbjct: 142 QK 143