BLASTX nr result

ID: Angelica23_contig00024887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024887
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519896.1| Surfeit locus protein, putative [Ricinus com...    81   1e-13
ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II tra...    76   2e-12
emb|CAN83083.1| hypothetical protein VITISV_001331 [Vitis vinifera]    76   2e-12
ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_003595880.1| Mediator of RNA polymerase II transcription ...    76   3e-12

>ref|XP_002519896.1| Surfeit locus protein, putative [Ricinus communis]
           gi|223540942|gb|EEF42500.1| Surfeit locus protein,
           putative [Ricinus communis]
          Length = 150

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/62 (66%), Positives = 46/62 (74%)
 Frame = -1

Query: 330 VSELKQTAIFSGFATLNDHVKQRT*ELNQLENKTEGTLAGIGENDVDSITDLESEYYSSV 151
           VSELKQTAIFSGFA+LNDHV QR  E NQ E +T+G LA +GE    S+ DLES YYSS 
Sbjct: 82  VSELKQTAIFSGFASLNDHVDQRIVEFNQQEEETDGILAKVGEEAAASLKDLESHYYSSA 141

Query: 150 RR 145
            R
Sbjct: 142 HR 143


>ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II transcription subunit 22
           [Vitis vinifera] gi|297736089|emb|CBI24127.3| unnamed
           protein product [Vitis vinifera]
          Length = 150

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/62 (64%), Positives = 45/62 (72%)
 Frame = -1

Query: 330 VSELKQTAIFSGFATLNDHVKQRT*ELNQLENKTEGTLAGIGENDVDSITDLESEYYSSV 151
           VSELKQTAIFSGFA+LNDHV QR  E NQ   KT+  LA IGE    S+ +LES YYSS 
Sbjct: 82  VSELKQTAIFSGFASLNDHVDQREAEFNQQAEKTDHLLARIGEEAAASLKELESHYYSSA 141

Query: 150 RR 145
           +R
Sbjct: 142 QR 143


>emb|CAN83083.1| hypothetical protein VITISV_001331 [Vitis vinifera]
          Length = 180

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 40/62 (64%), Positives = 45/62 (72%)
 Frame = -1

Query: 330 VSELKQTAIFSGFATLNDHVKQRT*ELNQLENKTEGTLAGIGENDVDSITDLESEYYSSV 151
           VSELKQTAIFSGFA+LNDHV QR  E NQ   KT+  LA IGE    S+ +LES YYSS 
Sbjct: 112 VSELKQTAIFSGFASLNDHVDQREAEFNQQAEKTDHLLARIGEEAAASLKELESHYYSSA 171

Query: 150 RR 145
           +R
Sbjct: 172 QR 173


>ref|XP_002312218.1| predicted protein [Populus trichocarpa] gi|222852038|gb|EEE89585.1|
           predicted protein [Populus trichocarpa]
          Length = 158

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/62 (62%), Positives = 45/62 (72%)
 Frame = -1

Query: 330 VSELKQTAIFSGFATLNDHVKQRT*ELNQLENKTEGTLAGIGENDVDSITDLESEYYSSV 151
           VSELKQTAIFSGFA+LNDHV QR  E  QL  KT+  LA IGE    S+ +LE+ YYSS 
Sbjct: 90  VSELKQTAIFSGFASLNDHVDQRIGEFTQLAEKTDSMLARIGEEAAASLKELETHYYSSA 149

Query: 150 RR 145
           +R
Sbjct: 150 QR 151


>ref|XP_003595880.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355484928|gb|AES66131.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 150

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/62 (62%), Positives = 47/62 (75%)
 Frame = -1

Query: 330 VSELKQTAIFSGFATLNDHVKQRT*ELNQLENKTEGTLAGIGENDVDSITDLESEYYSSV 151
           VSELKQTAIFSGFA+LNDHV+QR  E NQL  KT+ TL+ IGE    S+ +LES Y SS 
Sbjct: 82  VSELKQTAIFSGFASLNDHVEQRRLEFNQLAEKTDHTLSTIGEEAAASLKELESHYSSSA 141

Query: 150 RR 145
           ++
Sbjct: 142 QK 143


Top