BLASTX nr result

ID: Angelica23_contig00024720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024720
         (1131 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            280   6e-73
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]   275   1e-71
emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]   260   4e-67
gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   257   3e-66
gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsi...   244   4e-62

>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  280 bits (715), Expect = 6e-73
 Identities = 172/393 (43%), Positives = 223/393 (56%), Gaps = 19/393 (4%)
 Frame = -3

Query: 1123 TPYHKLTGIQPSLDHLRVFGSLCFASTIADGRTKFSPRSVPCVFLGYSVSQKGYKVFSLH 944
            +P+    G +PSL HLRV G LC+A        KF  RS+  V +GYS +QKGYK++ L 
Sbjct: 472  SPFAVFFGKEPSLHHLRVMGCLCYAVNHHTHGDKFDTRSIKSVLMGYSTTQKGYKLYDLS 531

Query: 943  DEHLFVSRDIIFHENHFPF-HSQSSSTEFPAEIFLPSVTTSCYTDDISVAHSNTSNLTSF 767
             +  F+SRD+ F E+ +PF H Q  S +     F  +     Y DD S    + + +TS 
Sbjct: 532  TQTFFISRDVTFREDQYPFQHIQDESCD---SSFFENPDMFVY-DDSSTIPLHETFITSP 587

Query: 766  DFVQPVSNIQSVSDNXXXXXXXXXXXXXXXXXXXXXSVPTSVSASDHVPVRKSTRNHQPP 587
            D  Q  ++I + S +                      +      S    +R+STR+ +PP
Sbjct: 588  D--QTSTSIDTPSPS---------------------PISHHFGTSTTTDLRRSTRSSKPP 624

Query: 586  SYLSSY-HCATVS-TPKHWCNL------------VQNPVSVSSCD---IVEPRSYQEAAS 458
             +L  + H AT S T    C+             +  P   S C+   I EP SY EA  
Sbjct: 625  GWLHDFVHIATHSPTSSLTCSTAHPLSSYMSYSSISTPYFQSLCNFSAIPEPTSYNEAVQ 684

Query: 457  SSVWVEAMQTELQALHANHTWDLVPLPANKKSIGSKWIFKVKRKADGSLERCKARLVAKG 278
             S W++AM+ EL+ALH NHTWDLVPLP  KK+IG KW++KVK  A G +ER KARLVAKG
Sbjct: 685  HSHWIQAMELELKALHDNHTWDLVPLPLGKKAIGCKWVYKVKFNAQGEVERYKARLVAKG 744

Query: 277  YNQRFGIDYEETFSPVVKMSTVRILLSLAASKHWKLHQLDVNNAFLHGTLKEEVYMSVPE 98
            Y Q+ G+DY+ETFSPVVKM TVR++LSLAA   W LHQ+DV NAFL G L EEVYM  P 
Sbjct: 745  YTQQEGLDYQETFSPVVKMVTVRVVLSLAAMHGWFLHQMDVFNAFLQGDLVEEVYMVPPP 804

Query: 97   G-LPNPNNLVCLLRKSIYGLKQASREWHEKLFE 2
            G L    + VC L KS+YGLKQASR+W+ KL E
Sbjct: 805  GLLQQGESKVCKLNKSLYGLKQASRQWNLKLSE 837


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score =  275 bits (704), Expect = 1e-71
 Identities = 163/405 (40%), Positives = 225/405 (55%), Gaps = 31/405 (7%)
 Frame = -3

Query: 1129 NDTPYHKLTGIQPSLDHLRVFGSLCFASTIADGRTKFSPRSVPCVFLGYSVSQKGYKVFS 950
            N TPY  L    P+ ++ + FG LCFASTI + R KF PR+  C+FLGY  + KGYKV  
Sbjct: 710  NQTPYQLLFQKPPNYNYFKXFGCLCFASTITNNRGKFQPRATKCIFLGYPPNIKGYKVLD 769

Query: 949  LHDEHLFVSRDIIFHENHFP-----FHSQSSSTEFPAEIFLPSVTTSCYTDDISVAHSNT 785
            L     FVSR+++FHE+ FP      H      +FP +I+    + SC  ++     S +
Sbjct: 770  LTTXKXFVSRNVJFHESTFPSIPDTIHKPFVFXDFP-QIY---ESKSCKPNNSVSITSGS 825

Query: 784  SNLTSFDFVQPVSNIQS-VSDNXXXXXXXXXXXXXXXXXXXXXSVPTSVSASDHVPVRKS 608
            +N T      P S I+S + +N                        T  + +D   +R+S
Sbjct: 826  TNSTD-----PTSXIESSIPEN------------------------TIHANNDANSLRRS 856

Query: 607  TRNHQPPSYLSSYHCATVST------PKHWCNLVQNPVSVSS------------------ 500
             R    P YL +Y+C  ++           C+    P  + S                  
Sbjct: 857  ERTKHLPKYLQNYYCGNMTKIDLATQAPSSCSSSGKPYYIFSFLSDSKLSSKHKAFISII 916

Query: 499  CDIVEPRSYQEAASSSVWVEAMQTELQALHANHTWDLVPLPANKKSIGSKWIFKVKRKAD 320
                EP++Y++A S   W  AM  E++AL  N TWDL  LP NK +IG KW+++VK KAD
Sbjct: 917  SSTFEPKTYKQAVSIPHWKTAMTDEIKALEHNKTWDLAILPPNKTTIGCKWVYQVKFKAD 976

Query: 319  GSLERCKARLVAKGYNQRFGIDYEETFSPVVKMSTVRILLSLAASKHWKLHQLDVNNAFL 140
            GS+ER KARLVAKGY Q+ G+D+ +T+SPV KM+TVR+LL++AA+K W LHQLDVNNAFL
Sbjct: 977  GSVERYKARLVAKGYTQQEGLDFFDTYSPVAKMTTVRVLLAIAATKQWYLHQLDVNNAFL 1036

Query: 139  HGTLKEEVYMSVPEGLPNPNN-LVCLLRKSIYGLKQASREWHEKL 8
            H  L E+VYM +P G   PN+  VC L+KS+YGL+QASR+W+ KL
Sbjct: 1037 HEDLNEDVYMQLPPGFSTPNDPRVCKLKKSLYGLRQASRQWYSKL 1081


>emb|CAN74229.1| hypothetical protein VITISV_000584 [Vitis vinifera]
          Length = 1039

 Score =  260 bits (665), Expect = 4e-67
 Identities = 153/389 (39%), Positives = 205/389 (52%), Gaps = 18/389 (4%)
 Frame = -3

Query: 1123 TPYHKLTGIQPSLDHLRVFGSLCFASTIADGRTKFSPRSVPCVFLGYSVSQKGYKVFSLH 944
            +PY  L    PS  HLR FG LC+A+ +     KF  R+  C+F+GY + QKGY+V+ L 
Sbjct: 335  SPYQLLXNKLPSYHHLRTFGCLCYATNLLPTH-KFDQRARRCIFVGYPLGQKGYRVYDLE 393

Query: 943  DEHLFVSRDIIFHENHFPFHSQSSSTEFPAEIF---------LPSVTTSCYTDD----IS 803
                F S D++FHE+ FPFH+     +    +          + + TT    DD    + 
Sbjct: 394  TNKFFSSXDVVFHEHIFPFHTNPQEEQHDVVVLPLPQTSYEPITTETTKPQADDQPPPLL 453

Query: 802  VAHSNTSNLTSFD---FVQPVSNIQSVSDNXXXXXXXXXXXXXXXXXXXXXSVPTSVSAS 632
             +  +TSN  + D    V P       SD                      S  +S+S +
Sbjct: 454  SSLESTSNERTLDLDTIVSPPPPATRRSDRIKQPNVXLRNFHLYHTAKVXSSQSSSLSGT 513

Query: 631  DHVPVRKSTRNHQPPSYLSSYHCATVSTPKHWCNLVQNPVSVSSCDIVEPRSYQEAASSS 452
             H   R  +     P Y  ++ CA  +                   +VEP +Y++A    
Sbjct: 514  RHPLTRYISYAQLSPKY-RNFVCAITT-------------------LVEPTTYEQAVLDP 553

Query: 451  VWVEAMQTELQALHANHTWDLVPLPANKKSIGSKWIFKVKRKADGSLERCKARLVAKGYN 272
             W EAM  EL AL  NHTW L PLP+  + IG KW++K+K  +DG++ER KARLVAKG+ 
Sbjct: 554  KWQEAMAAELHALEQNHTWTLTPLPSGHRPIGCKWVYKIKYNSDGTVERYKARLVAKGFT 613

Query: 271  QRFGIDYEETFSPVVKMSTVRILLSLAASKHWKLHQLDVNNAFLHGTLKEEVYMSVPEGL 92
            QR GIDY+ETFSPV K++TVR LL++AA +HW LHQ+DV NAFLHG L EEVYM +P G 
Sbjct: 614  QREGIDYKETFSPVAKLTTVRCLLAIAAVRHWSLHQMDVQNAFLHGDLLEEVYMQLPPGF 673

Query: 91   PNPNN--LVCLLRKSIYGLKQASREWHEK 11
                   +VC   KS+YGLKQASR W  K
Sbjct: 674  XRQGETPMVCRXNKSLYGLKQASRSWFXK 702


>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
            (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  257 bits (657), Expect = 3e-66
 Identities = 155/389 (39%), Positives = 214/389 (55%), Gaps = 19/389 (4%)
 Frame = -3

Query: 1120 PYHKLTGIQPSLDHLRVFGSLCFASTIADGRTKFSPRSVPCVFLGYSVSQKGYKVFSLHD 941
            P+  LT   P+ DH++VFG LC+AST    R KFSPR+  C F+GY    KGYK+  L  
Sbjct: 613  PFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPSGFKGYKLLDLET 672

Query: 940  EHLFVSRDIIFHENHFPFHSQSSSTEFPAEIFLPSVTTSCYTDDISVAHSNTSNLTSFDF 761
              + VSR ++FHE  FPF     S E   + F P +  +      S  H N S+ +S   
Sbjct: 673  HSIIVSRHVVFHEELFPFLGSDLSQE--EQNFFPDLNPTPPMQRQSSDHVNPSDSSSSVE 730

Query: 760  VQPVSNIQSVSDNXXXXXXXXXXXXXXXXXXXXXSVPTSVSASDHVP---VRKSTRNHQP 590
            + P +N                              PT+     +VP   V+ S R  + 
Sbjct: 731  ILPSAN------------------------------PTN-----NVPEPSVQTSHRKAKK 755

Query: 589  PSYLSSYHCATV--STPKHWCNL-----VQNP-VSVSSC--DIVEPRSYQEAASSSVWVE 440
            P+YL  Y+C +V  STP           + +P ++  +C     EP +Y EA    VW +
Sbjct: 756  PAYLQDYYCHSVVSSTPHEIRKFLSYDRINDPYLTFLACLDKTKEPSNYTEAEKLQVWRD 815

Query: 439  AMQTELQALHANHTWDLVPLPANKKSIGSKWIFKVKRKADGSLERCKARLVAKGYNQRFG 260
            AM  E   L   HTW++  LPA+K+ IG +WIFK+K  +DGS+ER KARLVA+GY Q+ G
Sbjct: 816  AMGAEFDFLEGTHTWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEG 875

Query: 259  IDYEETFSPVVKMSTVRILLSLAASKHWKLHQLDVNNAFLHGTLKEEVYMSVPEGLPN-- 86
            IDY ETFSPV K+++V++LL +AA     L QLD++NAFL+G L EE+YM +P+G  +  
Sbjct: 876  IDYNETFSPVAKLNSVKLLLGVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQ 935

Query: 85   ----PNNLVCLLRKSIYGLKQASREWHEK 11
                P N VC L+KS+YGLKQASR+W+ K
Sbjct: 936  GDSLPPNAVCRLKKSLYGLKQASRQWYLK 964


>gb|AAD25830.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1015

 Score =  244 bits (622), Expect = 4e-62
 Identities = 143/366 (39%), Positives = 208/366 (56%), Gaps = 19/366 (5%)
 Frame = -3

Query: 1051 ASTIADGRTKFSPRSVPCVFLGYSVSQKGYKVFSLHDEHLFVSRDIIFHENHFPFHSQSS 872
            +ST +  R KF PR+  C+FLGY    KGYK+  L  + + +SR+++FHE  FPF S  S
Sbjct: 451  SSTSSKNRHKFQPRAKACIFLGYPSGYKGYKLLDLETKSIHISRNVVFHETRFPFSSGDS 510

Query: 871  STEFPAEIFLPSVTTSCYTDDISVAHSNTSNLTSFDFV--QPVSNIQ-SVSDNXXXXXXX 701
            +  F ++IF  S+  S   +D  +  SN   + S   +  +P++ +  SV+D+       
Sbjct: 511  AGPF-SDIF-GSINESLIENDTEIVDSNIPVVVSEAPILSEPLTVVNDSVNDSHEDSAPK 568

Query: 700  XXXXXXXXXXXXXXSVPTSVSASDHVPVRKSTRNHQPPSYLSSYHCATVSTPKHW----- 536
                           VPT+ ++       +S R  + P++L  Y C        +     
Sbjct: 569  S--------------VPTTSTS-------RSKRESKQPAHLKDYFCNLSRKGVQYPLSDY 607

Query: 535  --CNLVQNPVSVSSCDIV---EPRSYQEAASSSVWVEAMQTELQALHANHTWDLVPLPAN 371
               + +  P     C +    EP S+ +A  S  W++AM  ELQAL    TW++  LP+N
Sbjct: 608  MSYDQLSTPYRAYICSVTKFSEPSSFFQAKKSDDWIKAMNAELQALEGTATWEICSLPSN 667

Query: 370  KKSIGSKWIFKVKRKADGSLERCKARLVAKGYNQRFGIDYEETFSPVVKMSTVRILLSLA 191
            KK+IG KW++KVK   DG+LER KARLVAKGY Q+ G+D+E+TFSPV KM+TV+ LL++A
Sbjct: 668  KKAIGCKWVYKVKLNVDGTLERYKARLVAKGYTQQEGVDFEDTFSPVAKMTTVKTLLAVA 727

Query: 190  ASKHWKLHQLDVNNAFLHGTLKEEVYMSV------PEGLPNPNNLVCLLRKSIYGLKQAS 29
            A+K W LHQLD++NAFL+  L EE+YM++       EG   P N VC L+KS+YGLKQ S
Sbjct: 728  AAKKWSLHQLDISNAFLNRDLYEEIYMNLAPGYTPKEGEEIPPNAVCKLKKSLYGLKQDS 787

Query: 28   REWHEK 11
            R+W  K
Sbjct: 788  RQWFLK 793


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