BLASTX nr result

ID: Angelica23_contig00024671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024671
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]            189   3e-46
emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]   173   2e-41
gb|ACB45081.1| putative polyprotein [Solanum habrochaites]            172   3e-41
gb|ACB45089.1| putative polyprotein [Solanum habrochaites]            169   4e-40
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   168   6e-40

>gb|ABH07899.1| putative polyprotein [Solanum lycopersicum]
          Length = 1428

 Score =  189 bits (479), Expect = 3e-46
 Identities = 94/171 (54%), Positives = 116/171 (67%)
 Frame = +2

Query: 8    QFSTSIKTIHSDNALEFLDSKCTQFFNQHGIVHQQSFSHRPQQNARVERKRRVILEIARS 187
            QF++ +K + SDN  EFL+S+C   FN  GI+HQ S  H PQQN  VERK R IL IAR+
Sbjct: 616  QFNSHVKVVRSDNGTEFLNSQCKDLFNHLGILHQSSCPHTPQQNGVVERKHRHILNIARA 675

Query: 188  IRFHAHLSLSFWGYCVESAVYLMNRLPSSVLQNKTPYELLFKKPPDYSTLKVIGCLAFAT 367
            IRF AHL + FWGYC+ +AVYLMNRLPSS   NK+ YELL+ K P    LKVIGCL +AT
Sbjct: 676  IRFQAHLPIRFWGYCIRAAVYLMNRLPSSANSNKSAYELLYCKQPSLFHLKVIGCLCYAT 735

Query: 368  NPSFTSDKLAARAVPCLFLGYHATKKGYTLLDLKTHYTFVSQDVLFHEHIF 520
                  DK +ARA   + LGY   +KGY LLD+ +    V++DV+FHE IF
Sbjct: 736  TVP-KGDKFSARASAAILLGYSELQKGYVLLDIHSTKVHVNRDVVFHEEIF 785


>emb|CAN69190.1| hypothetical protein VITISV_001578 [Vitis vinifera]
          Length = 1323

 Score =  173 bits (438), Expect = 2e-41
 Identities = 87/171 (50%), Positives = 112/171 (65%)
 Frame = +2

Query: 8   QFSTSIKTIHSDNALEFLDSKCTQFFNQHGIVHQQSFSHRPQQNARVERKRRVILEIARS 187
           QF   IKT  SDN  EF   +   FF  +G++ Q S  + PQQN  VERK R IL++AR+
Sbjct: 481 QFEFRIKTFRSDNGXEFTSLR--SFFQDNGVIFQHSCVYTPQQNGVVERKHRHILQVARA 538

Query: 188 IRFHAHLSLSFWGYCVESAVYLMNRLPSSVLQNKTPYELLFKKPPDYSTLKVIGCLAFAT 367
           ++FHA +   FWG C  +AV+++NRLPS +L  KTP+ELL+ KPP YS L+V GCLA+AT
Sbjct: 539 LKFHAQVPTQFWGECALTAVHIINRLPSPILSFKTPFELLYSKPPSYSHLRVFGCLAYAT 598

Query: 368 NPSFTSDKLAARAVPCLFLGYHATKKGYTLLDLKTHYTFVSQDVLFHEHIF 520
           N   TS K   RA+P +F+GY   +K Y L DL T   F S+DV FHE IF
Sbjct: 599 N-VHTSHKFDYRAMPSIFIGYPVGQKAYKLFDLSTKKVFTSRDVKFHEDIF 648


>gb|ACB45081.1| putative polyprotein [Solanum habrochaites]
          Length = 559

 Score =  172 bits (437), Expect = 3e-41
 Identities = 81/173 (46%), Positives = 116/173 (67%)
 Frame = +2

Query: 2   KNQFSTSIKTIHSDNALEFLDSKCTQFFNQHGIVHQQSFSHRPQQNARVERKRRVILEIA 181
           K QF+  +K   SDN  EF +++ ++ F   GI+HQ S  + PQQN  VERK R I+E A
Sbjct: 29  KTQFNVQVKVFRSDNGGEFFNAQVSELFQSQGIIHQSSCPYTPQQNGVVERKHRHIMETA 88

Query: 182 RSIRFHAHLSLSFWGYCVESAVYLMNRLPSSVLQNKTPYELLFKKPPDYSTLKVIGCLAF 361
           R+IRF  ++ + FWG C  +AV+++NR+PS+VL NK+P+E++F KPPD S +K+IGCL +
Sbjct: 89  RAIRFQGNIPIKFWGECALAAVHIINRIPSTVLLNKSPFEIMFGKPPDLSYMKIIGCLCY 148

Query: 362 ATNPSFTSDKLAARAVPCLFLGYHATKKGYTLLDLKTHYTFVSQDVLFHEHIF 520
           AT     SDK   RA+  + + Y  T+KGY L DL+    FVS+DV+F+E  F
Sbjct: 149 ATT-LLRSDKFGPRAIKSVLMSYGTTQKGYKLYDLQNKVFFVSRDVVFNEFTF 200


>gb|ACB45089.1| putative polyprotein [Solanum habrochaites]
          Length = 849

 Score =  169 bits (427), Expect = 4e-40
 Identities = 80/170 (47%), Positives = 109/170 (64%)
 Frame = +2

Query: 2   KNQFSTSIKTIHSDNALEFLDSKCTQFFNQHGIVHQQSFSHRPQQNARVERKRRVILEIA 181
           + QF   IK   SDN  EF +S C++ F   GIVHQ S  + PQQN  VER+ R ILE+A
Sbjct: 376 QRQFGGYIKIFRSDNGTEFFNSHCSELFRTAGIVHQSSCVYTPQQNGVVERRHRQILEVA 435

Query: 182 RSIRFHAHLSLSFWGYCVESAVYLMNRLPSSVLQNKTPYELLFKKPPDYSTLKVIGCLAF 361
           R+IRF A+L + FWG CV++AVYL+NR+PS+ L  ++P+ + F K P    L+V+GCL +
Sbjct: 436 RAIRFQANLPIRFWGLCVQNAVYLINRIPSTALSGRSPFAVFFGKEPSLHHLRVMGCLCY 495

Query: 362 ATNPSFTSDKLAARAVPCLFLGYHATKKGYTLLDLKTHYTFVSQDVLFHE 511
           A N     DK   R++  + +GY  T+KGY L DL T   F+S+DV F E
Sbjct: 496 AVNHHTHGDKFDTRSIKSVLMGYSTTQKGYKLYDLSTQTFFISRDVTFRE 545


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  168 bits (425), Expect = 6e-40
 Identities = 85/173 (49%), Positives = 113/173 (65%)
 Frame = +2

Query: 2   KNQFSTSIKTIHSDNALEFLDSKCTQFFNQHGIVHQQSFSHRPQQNARVERKRRVILEIA 181
           + QF T IKT+ SDN  EFL  +  ++F   GI H+ S    P QN RVERK R IL IA
Sbjct: 403 ERQFDTEIKTVRSDNGTEFLCMR--EYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIA 460

Query: 182 RSIRFHAHLSLSFWGYCVESAVYLMNRLPSSVLQNKTPYELLFKKPPDYSTLKVIGCLAF 361
           R++RF ++L + FWG C+ SA YL+NR PS +LQ K+PYE+L+K  P YS L+V G L +
Sbjct: 461 RALRFQSYLPIQFWGECILSAAYLINRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCY 520

Query: 362 ATNPSFTSDKLAARAVPCLFLGYHATKKGYTLLDLKTHYTFVSQDVLFHEHIF 520
           A N +   DK AAR+  C+F+GY   +KG+ L DL+    FVS+DV+F E  F
Sbjct: 521 AHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFVSRDVIFQETEF 573


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