BLASTX nr result

ID: Angelica23_contig00024497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024497
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI38215.3| unnamed protein product [Vitis vinifera]               76   3e-12
ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containi...    76   3e-12
ref|XP_002519398.1| pentatricopeptide repeat-containing protein,...    73   3e-11
ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    60   1e-07
ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containi...    60   1e-07

>emb|CBI38215.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/52 (65%), Positives = 45/52 (86%)
 Frame = +3

Query: 18  LGKNVMEKLERIESERDGAYVLMSNIYSSSDRWREASTLRKAMKELNIKKNP 173
           LG++VM+K+E+IE  +DGAYVLMSNIYSS++RWR+A  LRK MKE N++K P
Sbjct: 493 LGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTP 544


>ref|XP_002265179.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 617

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 34/52 (65%), Positives = 45/52 (86%)
 Frame = +3

Query: 18  LGKNVMEKLERIESERDGAYVLMSNIYSSSDRWREASTLRKAMKELNIKKNP 173
           LG++VM+K+E+IE  +DGAYVLMSNIYSS++RWR+A  LRK MKE N++K P
Sbjct: 515 LGESVMKKIEKIEPRKDGAYVLMSNIYSSANRWRDALKLRKTMKERNLEKTP 566


>ref|XP_002519398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541465|gb|EEF43015.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 615

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/52 (65%), Positives = 43/52 (82%)
 Frame = +3

Query: 18  LGKNVMEKLERIESERDGAYVLMSNIYSSSDRWREASTLRKAMKELNIKKNP 173
           LG+ V++KL  +E ERDGAY+LMSNIYSS++RWR+A   RKAMK+ NIKK P
Sbjct: 526 LGETVIQKLIEMEPERDGAYILMSNIYSSANRWRDALKWRKAMKQNNIKKTP 577


>ref|XP_004168141.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g37310-like [Cucumis sativus]
          Length = 635

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +3

Query: 18  LGKNVMEKLERIESERDGAYVLMSNIYSSSDRWREASTLRKAMKELNIKKNP 173
           LGK V ++L  IE E  G YV+M+N+YS S RW++A T+R  MKE+ +KK P
Sbjct: 529 LGKYVFDRLFEIEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIP 580


>ref|XP_004137952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37310-like [Cucumis sativus]
          Length = 595

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 27/52 (51%), Positives = 37/52 (71%)
 Frame = +3

Query: 18  LGKNVMEKLERIESERDGAYVLMSNIYSSSDRWREASTLRKAMKELNIKKNP 173
           LGK V ++L  IE E  G YV+M+N+YS S RW++A T+R  MKE+ +KK P
Sbjct: 529 LGKYVFDRLFEIEPENTGNYVIMANLYSQSGRWKDADTIRDLMKEVRLKKIP 580


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