BLASTX nr result

ID: Angelica23_contig00024233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024233
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ri...   207   5e-52
ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|2...   200   1e-49
ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL...   183   1e-44
ref|XP_002463953.1| hypothetical protein SORBIDRAFT_01g009490 [S...   181   7e-44
ref|NP_001131416.1| uncharacterized protein LOC100192745 [Zea ma...   174   9e-42

>ref|XP_002531985.1| Ubiquitin ligase protein FANCL, putative [Ricinus communis]
           gi|223528344|gb|EEF30384.1| Ubiquitin ligase protein
           FANCL, putative [Ricinus communis]
          Length = 309

 Score =  207 bits (528), Expect = 5e-52
 Identities = 96/153 (62%), Positives = 119/153 (77%)
 Frame = +1

Query: 4   PPSISADVPYILTLEWLVNYRLKNVVKQFQEHLEKLQEFWSTLDVIDHDLWVVYPKQPSA 183
           PPS+SADVPYI ++ W +N RLK++++QF EHLEKLQEFWSTL+ ID+ L VV   + S 
Sbjct: 39  PPSVSADVPYIFSVRWSMNSRLKDLMQQFHEHLEKLQEFWSTLEDIDNSLCVVDIHKSSH 98

Query: 184 ATCYRQINMGDDCFLMLFISAMDPRSLPECRFTGSDQKVNLLRKMWRRNCKRWMKDKQFP 363
           A  +RQI++G+DCF+MLFI+  DPRSLPECRF GS    + LRK W+RNCK+WM+DK F 
Sbjct: 99  AISFRQIDIGNDCFIMLFINTKDPRSLPECRFLGSGPVAHSLRKRWQRNCKQWMQDKTFL 158

Query: 364 ENLTNIFELKLPGPPSVHMNDQQTECGICYAQY 462
           ENL +I E +LP PP V  NDQQ ECGICYAQY
Sbjct: 159 ENLLSILETELPKPPDVQKNDQQIECGICYAQY 191


>ref|XP_002310876.1| predicted protein [Populus trichocarpa] gi|222853779|gb|EEE91326.1|
           predicted protein [Populus trichocarpa]
          Length = 270

 Score =  200 bits (508), Expect = 1e-49
 Identities = 97/153 (63%), Positives = 115/153 (75%)
 Frame = +1

Query: 4   PPSISADVPYILTLEWLVNYRLKNVVKQFQEHLEKLQEFWSTLDVIDHDLWVVYPKQPSA 183
           PPS+SA+VPYI  ++W V  RLK++V QF+EHLE+LQEFWSTL+ IDH L V   K+ S 
Sbjct: 46  PPSVSAEVPYIFNVKWSVKSRLKDLVLQFREHLEELQEFWSTLEDIDHSLCVTNKKKLSR 105

Query: 184 ATCYRQINMGDDCFLMLFISAMDPRSLPECRFTGSDQKVNLLRKMWRRNCKRWMKDKQFP 363
           AT  RQI++G+DC +ML I+A DPRSLPECRF GS   VN +RK+W RN KRWMKDK  P
Sbjct: 106 ATTCRQIDIGNDCSIMLSINARDPRSLPECRFMGSGPVVNPVRKLWLRNNKRWMKDKTLP 165

Query: 364 ENLTNIFELKLPGPPSVHMNDQQTECGICYAQY 462
           ENL  I E +LP P  V  NDQQ ECGICYAQY
Sbjct: 166 ENLAFILETELPRPSHVLENDQQVECGICYAQY 198


>ref|XP_003559474.1| PREDICTED: E3 ubiquitin-protein ligase FANCL-like [Brachypodium
           distachyon]
          Length = 311

 Score =  183 bits (464), Expect = 1e-44
 Identities = 86/155 (55%), Positives = 112/155 (72%), Gaps = 1/155 (0%)
 Frame = +1

Query: 1   CPPSISADVPYILTLEWLVNYRLKNVVKQFQEHLEKLQEFWSTLDVIDHDLWVVYPKQPS 180
           CPPSISADVP +  L+W    RLK+VV QFQEHL+ LQ +W T+D ID  LWVV P +PS
Sbjct: 89  CPPSISADVPCLPKLQWSKLSRLKDVVCQFQEHLKNLQNYWCTMDDIDKALWVVDPTKPS 148

Query: 181 AATCYRQINMGDDCFLMLFISAMDPRSLPECRFTGSDQKVNLLRKMWRRNCKRWMKDKQF 360
            A  +R+I +GDDC+++L + A  P SLPECRF G+D K+  L K WR+N KRW  DK+F
Sbjct: 149 YAMSHRRIALGDDCYILLHVDAHKPSSLPECRFLGTDGKLERLIKNWRKNRKRWTADKKF 208

Query: 361 PENLTNIFELKLPGPPSVHM-NDQQTECGICYAQY 462
            ENL+ + + +LP PPSV + +DQQ +CGICYA +
Sbjct: 209 HENLSTVLDFELPQPPSVSIKDDQQADCGICYATH 243


>ref|XP_002463953.1| hypothetical protein SORBIDRAFT_01g009490 [Sorghum bicolor]
           gi|241917807|gb|EER90951.1| hypothetical protein
           SORBIDRAFT_01g009490 [Sorghum bicolor]
          Length = 361

 Score =  181 bits (458), Expect = 7e-44
 Identities = 82/157 (52%), Positives = 113/157 (71%), Gaps = 3/157 (1%)
 Frame = +1

Query: 1   CPPSISADVPYILTLEWLVNYRLKNVVKQFQEHLEKLQEFWSTLDVIDHDLWVVYPKQPS 180
           CPPSISAD+PY+  ++W  + RLK+V+ QFQ HL+ LQEFWST+D ID  LW+V P +PS
Sbjct: 137 CPPSISADIPYLPKIQWSKSSRLKDVLCQFQAHLKILQEFWSTMDEIDKVLWIVDPTKPS 196

Query: 181 AATCYRQINMGDDCFLMLFISAMDPRSLPECRFTGSDQKVNLLRKMWRRNCKRWMKDKQF 360
            A  +R+I++GDDC+++L + A  P SLPECRF G+D K++ L   WR+N K+W   K+F
Sbjct: 197 YAMSHRRISLGDDCYILLHVDARKPNSLPECRFLGTDDKLDQLIINWRKNRKKWDAKKKF 256

Query: 361 PENLTNIFELKLPGPPSVHMN---DQQTECGICYAQY 462
            ENLT + +  LP PP V  N   D+Q +CGICYA++
Sbjct: 257 HENLTAVLDFALPAPPLVSCNVKDDEQADCGICYAKH 293


>ref|NP_001131416.1| uncharacterized protein LOC100192745 [Zea mays]
           gi|194691460|gb|ACF79814.1| unknown [Zea mays]
           gi|413933185|gb|AFW67736.1| ubiquitin ligase protein
           FANCL [Zea mays]
          Length = 322

 Score =  174 bits (440), Expect = 9e-42
 Identities = 81/156 (51%), Positives = 110/156 (70%), Gaps = 3/156 (1%)
 Frame = +1

Query: 4   PPSISADVPYILTLEWLVNYRLKNVVKQFQEHLEKLQEFWSTLDVIDHDLWVVYPKQPSA 183
           PPSISADVPY+  + W  N RLK+V+ QFQ HL+ LQEFW+T+D ID  LW+V P +PS 
Sbjct: 99  PPSISADVPYLPKIHWSKNSRLKDVICQFQAHLKILQEFWNTMDEIDKVLWIVDPTKPSY 158

Query: 184 ATCYRQINMGDDCFLMLFISAMDPRSLPECRFTGSDQKVNLLRKMWRRNCKRWMKDKQFP 363
           A  +R+I +GDDC+++L + A  P SLPECRF G+D K++ L   WR+N K+W   K+F 
Sbjct: 159 AMSHRRIALGDDCYILLQVDARKPNSLPECRFLGTDGKLDQLIINWRKNRKKWDTKKKFH 218

Query: 364 ENLTNIFELKLPGPPSV---HMNDQQTECGICYAQY 462
           ENL  + +  LP PPSV     +D+Q +CGICYA++
Sbjct: 219 ENLAAVLDFALPSPPSVGDKAKDDEQADCGICYAKH 254


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