BLASTX nr result

ID: Angelica23_contig00024212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024212
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              80   6e-26
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 86   3e-25
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                80   3e-24
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    85   1e-23
gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]                          74   2e-23

>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 79.7 bits (195), Expect(2) = 6e-26
 Identities = 38/76 (50%), Positives = 51/76 (67%)
 Frame = -2

Query: 400 DNILLAQTLCKDYHLATGQPRCAIKLDIHKAFDSLSWAFIFKALERMNFPAHFIKWISTY 221
           +N+LLA  L KDYH  +   RCAIK+DI KAF+S+ W+FI   L  M+FP  F+ WI   
Sbjct: 100 ENLLLATELVKDYHKESVSSRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLC 159

Query: 220 VSTNMFSIKLNGCL*G 173
           +ST  FS+++NG L G
Sbjct: 160 ISTASFSVQVNGELVG 175



 Score = 62.8 bits (151), Expect(2) = 6e-26
 Identities = 30/60 (50%), Positives = 44/60 (73%)
 Frame = -1

Query: 182 LVGYFKGESGLH*GDPISPYLFVIAMEVLTACLNVSANKPEFRYHWRTKEIALHHLIFAD 3
           LVG+F+ + GL  G  +SPYLFV++M+VL+  L+ +A+  +F YH R KE++L HL FAD
Sbjct: 173 LVGFFQSKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSLTHLSFAD 232


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 86.3 bits (212), Expect(2) = 3e-25
 Identities = 39/76 (51%), Positives = 52/76 (68%)
 Frame = -2

Query: 400 DNILLAQTLCKDYHLATGQPRCAIKLDIHKAFDSLSWAFIFKALERMNFPAHFIKWISTY 221
           +N+LLA  L KDYH  +  PRCA+K+DI KAFDS+ W F+   LE +NFP +F  WI   
Sbjct: 146 ENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLC 205

Query: 220 VSTNMFSIKLNGCL*G 173
           +ST  FS+++NG L G
Sbjct: 206 ISTATFSVQVNGELAG 221



 Score = 53.9 bits (128), Expect(2) = 3e-25
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = -1

Query: 182 LVGYFKGESGLH*GDPISPYLFVIAMEVLTACLNVSANKPEFRYHWRTKEIALHHLIFAD 3
           L G+F  + GL  G  +SPYLFVI M VL+  ++V+A      YH + K+++L HL FAD
Sbjct: 219 LAGFFGSKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSLTHLCFAD 278


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 79.7 bits (195), Expect(2) = 3e-24
 Identities = 38/76 (50%), Positives = 51/76 (67%)
 Frame = -2

Query: 400 DNILLAQTLCKDYHLATGQPRCAIKLDIHKAFDSLSWAFIFKALERMNFPAHFIKWISTY 221
           +N+LLA  L KDYH  +   RCAIK+DI KAFDS+ W+F+   L  MNF   FI WI+  
Sbjct: 220 ENLLLATELVKDYHKDSISARCAIKIDISKAFDSVQWSFLTNTLVAMNFSPTFIHWINLC 279

Query: 220 VSTNMFSIKLNGCL*G 173
           ++T  FS+++NG L G
Sbjct: 280 ITTASFSVQVNGDLVG 295



 Score = 57.0 bits (136), Expect(2) = 3e-24
 Identities = 28/60 (46%), Positives = 40/60 (66%)
 Frame = -1

Query: 182 LVGYFKGESGLH*GDPISPYLFVIAMEVLTACLNVSANKPEFRYHWRTKEIALHHLIFAD 3
           LVGYF+ + GL  G  +SPYLFVI M+VL+  L+ +A   +F +H + + + L HL FAD
Sbjct: 293 LVGYFQSKRGLRQGCSLSPYLFVICMDVLSKMLDKAAGVRKFGFHPKCQRLGLTHLSFAD 352


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 84.7 bits (208), Expect(2) = 1e-23
 Identities = 39/76 (51%), Positives = 51/76 (67%)
 Frame = -2

Query: 400  DNILLAQTLCKDYHLATGQPRCAIKLDIHKAFDSLSWAFIFKALERMNFPAHFIKWISTY 221
            +N+LLA  L KDYH  +  PRCA+K+DI KAFDS+ W F+   LE +NFP  F  WI   
Sbjct: 870  ENVLLATELVKDYHKESVTPRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLC 929

Query: 220  VSTNMFSIKLNGCL*G 173
            +ST  FS+++NG L G
Sbjct: 930  ISTATFSVQVNGELAG 945



 Score = 50.1 bits (118), Expect(2) = 1e-23
 Identities = 26/60 (43%), Positives = 35/60 (58%)
 Frame = -1

Query: 182  LVGYFKGESGLH*GDPISPYLFVIAMEVLTACLNVSANKPEFRYHWRTKEIALHHLIFAD 3
            L G+F    GL  G  +SPYLFVI M VL+  ++ +A      YH + ++I L HL FAD
Sbjct: 943  LAGFFGSSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGLTHLCFAD 1002


>gb|AAC62779.1| F11O4.2 [Arabidopsis thaliana]
          Length = 382

 Score = 74.3 bits (181), Expect(2) = 2e-23
 Identities = 36/76 (47%), Positives = 50/76 (65%)
 Frame = -2

Query: 400 DNILLAQTLCKDYHLATGQPRCAIKLDIHKAFDSLSWAFIFKALERMNFPAHFIKWISTY 221
           +N+LLA  L KDYH  +   R AIK+DI KAFDS+ W+F+   L  M+ P+ F+ WI   
Sbjct: 23  ENLLLATELVKDYHKESISSRYAIKIDISKAFDSVQWSFLRNVLLAMDIPSEFVHWIMLC 82

Query: 220 VSTNMFSIKLNGCL*G 173
           V+T  FS+++NG L G
Sbjct: 83  VTTASFSVQVNGELAG 98



 Score = 59.7 bits (143), Expect(2) = 2e-23
 Identities = 29/60 (48%), Positives = 40/60 (66%)
 Frame = -1

Query: 182 LVGYFKGESGLH*GDPISPYLFVIAMEVLTACLNVSANKPEFRYHWRTKEIALHHLIFAD 3
           L GYF+ + GL  G  +SPYLFVI+M+VL   L+ +A   ++ YH R K++ L HL FAD
Sbjct: 96  LAGYFQSKCGLRQGCSLSPYLFVISMDVLAKMLDKAAGAKKYGYHPRCKDMGLTHLSFAD 155


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