BLASTX nr result

ID: Angelica23_contig00024197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024197
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004174164.1| PREDICTED: uncharacterized protein LOC101232...    73   1e-16
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]              59   4e-16
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                61   5e-16
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    57   6e-16
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 59   1e-15

>ref|XP_004174164.1| PREDICTED: uncharacterized protein LOC101232793, partial [Cucumis
           sativus]
          Length = 174

 Score = 73.2 bits (178), Expect(2) = 1e-16
 Identities = 32/62 (51%), Positives = 43/62 (69%)
 Frame = -1

Query: 186 ELYFATMKRMGFPDKFIAWVKICITSTMFSVKLNGCLEGFFKGESGHRQGDPLFLYLFVM 7
           +  F  +  +G P +F++WV+ C+TS MFS+ +NG LEGFF G  G RQGDPL  +LFVM
Sbjct: 31  DFLFGLLIAIGTPLRFVSWVRACVTSPMFSIMINGSLEGFFHGRKGLRQGDPLSPFLFVM 90

Query: 6   EM 1
            M
Sbjct: 91  VM 92



 Score = 38.1 bits (87), Expect(2) = 1e-16
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -2

Query: 272 LCKDYHLNSGPSRCAIKLDIHKAFDYLNWSFI 177
           L + YHL+ G  R  +K+D+ KA+D +NW F+
Sbjct: 2   LVRAYHLHRGKPRSTMKVDLQKAYDSVNWDFL 33


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score = 58.9 bits (141), Expect(2) = 4e-16
 Identities = 27/53 (50%), Positives = 37/53 (69%)
 Frame = -1

Query: 159 MGFPDKFIAWVKICITSTMFSVKLNGCLEGFFKGESGHRQGDPLFLYLFVMEM 1
           M FP +F+ W+ +CI++  FSV++NG L GFF+ + G RQG  L  YLFVM M
Sbjct: 146 MDFPMEFVHWIMLCISTASFSVQVNGELVGFFQSKRGLRQGCSLSPYLFVMSM 198



 Score = 50.4 bits (119), Expect(2) = 4e-16
 Identities = 23/40 (57%), Positives = 28/40 (70%)
 Frame = -2

Query: 296 DNVFLEQALCKDYHLNSGPSRCAIKLDIHKAFDYLNWSFI 177
           +N+ L   L KDYH  S  SRCAIK+DI KAF+ + WSFI
Sbjct: 100 ENLLLATELVKDYHKESVSSRCAIKIDISKAFNSVQWSFI 139


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 61.2 bits (147), Expect(2) = 5e-16
 Identities = 29/57 (50%), Positives = 39/57 (68%)
 Frame = -1

Query: 171 TMKRMGFPDKFIAWVKICITSTMFSVKLNGCLEGFFKGESGHRQGDPLFLYLFVMEM 1
           T+  M FP+ FI W+++CIT+  FSV++NG L GFF+   G RQG  L  YLFV+ M
Sbjct: 168 TLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQSSRGLRQGCALSPYLFVICM 224



 Score = 47.8 bits (112), Expect(2) = 5e-16
 Identities = 22/40 (55%), Positives = 27/40 (67%)
 Frame = -2

Query: 296 DNVFLEQALCKDYHLNSGPSRCAIKLDIHKAFDYLNWSFI 177
           +NV L   L KDYH +S   RCAIK+DI KA D + WSF+
Sbjct: 126 ENVLLATDLVKDYHKDSISERCAIKIDISKASDSVQWSFL 165


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 56.6 bits (135), Expect(2) = 6e-16
 Identities = 24/53 (45%), Positives = 36/53 (67%)
 Frame = -1

Query: 159 MGFPDKFIAWVKICITSTMFSVKLNGCLEGFFKGESGHRQGDPLFLYLFVMEM 1
           M FP +FI W+ +C+++  FS+++NG L G+F+   G RQG  L  YLFV+ M
Sbjct: 340 MNFPGEFIHWISLCMSTASFSIQVNGELAGYFRSARGLRQGCSLSPYLFVISM 392



 Score = 52.0 bits (123), Expect(2) = 6e-16
 Identities = 23/41 (56%), Positives = 30/41 (73%)
 Frame = -2

Query: 296 DNVFLEQALCKDYHLNSGPSRCAIKLDIHKAFDYLNWSFIS 174
           +NV L   L KDYH +S  +RCA+K+DI KAFD L WSF++
Sbjct: 294 ENVLLATELVKDYHKDSISTRCAMKIDISKAFDSLQWSFLT 334


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 59.3 bits (142), Expect(2) = 1e-15
 Identities = 27/57 (47%), Positives = 39/57 (68%)
 Frame = -1

Query: 171 TMKRMGFPDKFIAWVKICITSTMFSVKLNGCLEGFFKGESGHRQGDPLFLYLFVMEM 1
           T++ + FP+ F  W+K+CI++  FSV++NG L GFF  + G RQG  L  YLFV+ M
Sbjct: 188 TLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFGSKRGLRQGCALSPYLFVICM 244



 Score = 48.1 bits (113), Expect(2) = 1e-15
 Identities = 21/40 (52%), Positives = 27/40 (67%)
 Frame = -2

Query: 296 DNVFLEQALCKDYHLNSGPSRCAIKLDIHKAFDYLNWSFI 177
           +NV L   L KDYH +S   RCA+K+DI KAFD + W F+
Sbjct: 146 ENVLLATELVKDYHKDSISPRCAMKIDISKAFDSVQWQFL 185


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