BLASTX nr result

ID: Angelica23_contig00024125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00024125
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]    88   6e-16
ref|XP_003604260.1| CNGC5-like protein [Medicago truncatula] gi|...    73   2e-11
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   3e-11
gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptas...    73   3e-11
ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [S...    69   4e-10

>emb|CAN63032.1| hypothetical protein VITISV_024672 [Vitis vinifera]
          Length = 1413

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 40/62 (64%), Positives = 46/62 (74%)
 Frame = +1

Query: 73  KQALFAMHPDKSPGPDGMNPGFYQKFWSIIGKDVATECIHILNRGIIPGKLNDTVVVLIP 252
           K ALFAMHPDKSPG DG +PGFYQ+ W I+G+DVA  CI  LN G+ P  L  T +VLIP
Sbjct: 726 KDALFAMHPDKSPGNDGFSPGFYQRHWEIVGEDVANACIGWLNDGMFPDSLTRTNIVLIP 785

Query: 253 KK 258
           KK
Sbjct: 786 KK 787


>ref|XP_003604260.1| CNGC5-like protein [Medicago truncatula]
           gi|355505315|gb|AES86457.1| CNGC5-like protein [Medicago
           truncatula]
          Length = 1023

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/61 (55%), Positives = 44/61 (72%), Gaps = 2/61 (3%)
 Frame = +1

Query: 79  ALFAMHPDKSPGPDGMNPGFYQKFWSIIGKDV--ATECIHILNRGIIPGKLNDTVVVLIP 252
           ALF MHPDKSPGPDG N  F+Q+FWS+ G ++  AT+C   ++RG  P  LN+T + LIP
Sbjct: 41  ALFQMHPDKSPGPDGFNATFFQRFWSLCGDEIFEATKC--WMDRGFFPSSLNETNICLIP 98

Query: 253 K 255
           K
Sbjct: 99  K 99


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = +1

Query: 79  ALFAMHPDKSPGPDGMNPGFYQKFWSIIGKDVATECIHILNRGIIPGKLNDTVVVLIPKK 258
           AL  MHP+K+PGPDGMN  FYQ FW  IG+DV T+ +++LN     G +N T +VLIPKK
Sbjct: 445 ALAQMHPNKAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIPKK 504


>gb|ABD33126.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 653

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 30/61 (49%), Positives = 43/61 (70%)
 Frame = +1

Query: 73  KQALFAMHPDKSPGPDGMNPGFYQKFWSIIGKDVATECIHILNRGIIPGKLNDTVVVLIP 252
           + A+F M  DK+PGPDG+NP FY++FW++ G++V   C   L+ G +P  L DT +VLIP
Sbjct: 26  RDAIFQMQSDKAPGPDGLNPTFYKRFWTLCGEEVVAACRRWLHEGNLPTALGDTNIVLIP 85

Query: 253 K 255
           K
Sbjct: 86  K 86


>ref|XP_002451844.1| hypothetical protein SORBIDRAFT_04g008547 [Sorghum bicolor]
           gi|241931675|gb|EES04820.1| hypothetical protein
           SORBIDRAFT_04g008547 [Sorghum bicolor]
          Length = 599

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 29/61 (47%), Positives = 39/61 (63%)
 Frame = +1

Query: 73  KQALFAMHPDKSPGPDGMNPGFYQKFWSIIGKDVATECIHILNRGIIPGKLNDTVVVLIP 252
           ++ALF M  +K+PGPDG   GFYQ  W ++G  +    IH LN G +P  +N T +VLIP
Sbjct: 454 ERALFMMGANKAPGPDGFTAGFYQNHWDVVGPSITKAVIHFLNGGHMPEGINQTTIVLIP 513

Query: 253 K 255
           K
Sbjct: 514 K 514


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