BLASTX nr result

ID: Angelica23_contig00023989 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023989
         (323 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]    99   4e-19
ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14
ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containi...    78   9e-13
ref|XP_003612228.1| Pentatricopeptide repeat-containing protein ...    76   3e-12

>emb|CAN73672.1| hypothetical protein VITISV_031859 [Vitis vinifera]
          Length = 901

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/91 (49%), Positives = 66/91 (72%)
 Frame = -2

Query: 274 NHLLHLLQTCQNMTHLYQIQAHLTTSSLFQNPSFSARILKLSADYGQIDYTLLLFKCISF 95
           N  L LL+TC+NM  L QIQA+L  S LF+ P  ++++LK+SADY  ++YT+L+F+ I  
Sbjct: 373 NSCLALLKTCRNMRQLSQIQAYLIISGLFRKPFVASKVLKVSADYADVNYTILIFRSIDS 432

Query: 94  PDTFCYNVVVKACALSCVPHKAVLFYFVMLK 2
           PDT C N V+KA ++S V H+A++FYF  L+
Sbjct: 433 PDTVCVNAVIKAYSISSVAHQALVFYFETLR 463


>ref|XP_002327644.1| predicted protein [Populus trichocarpa] gi|222836729|gb|EEE75122.1|
           predicted protein [Populus trichocarpa]
          Length = 564

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 51/101 (50%), Positives = 63/101 (62%)
 Frame = -2

Query: 304 LTLYNTTPSINHLLHLLQTCQNMTHLYQIQAHLTTSSLFQNPSFSARILKLSADYGQIDY 125
           +T YN     N    LL +  N  HLYQIQA L T  LF    +S R+LK  AD+G IDY
Sbjct: 47  ITSYN-----NPRFELLYSTLNPFHLYQIQAQLITCGLFS--LWSPRLLKHFADFGDIDY 99

Query: 124 TLLLFKCISFPDTFCYNVVVKACALSCVPHKAVLFYFVMLK 2
           T+ +FK I+ P TF  N VVKA +LS  P+KA++FYF MLK
Sbjct: 100 TIFIFKFIASPGTFVVNNVVKAYSLSSEPNKALVFYFEMLK 140


>ref|XP_004135020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Cucumis sativus]
          Length = 575

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/93 (44%), Positives = 60/93 (64%)
 Frame = -2

Query: 283 PSINHLLHLLQTCQNMTHLYQIQAHLTTSSLFQNPSFSARILKLSADYGQIDYTLLLFKC 104
           P  N    LLQ+CQ++  L+Q   HL TS LF +  ++ R+L  ++++G I YT+L+F+ 
Sbjct: 47  PRHNQSHSLLQSCQSVRELFQFHGHLITSGLFNDHFWANRVLLQASEFGDIVYTVLIFRH 106

Query: 103 ISFPDTFCYNVVVKACALSCVPHKAVLFYFVML 5
           I  P+TFC N V+KA +LS VP +AV  YF  L
Sbjct: 107 IKVPNTFCVNRVIKAYSLSTVPLEAVFVYFEWL 139


>ref|XP_003516541.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g51320-like [Glycine max]
          Length = 579

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 40/88 (45%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
 Frame = -2

Query: 274 NHLLHLLQ-TCQNMTHLYQIQAHLTTSSLFQNPSFSARILKLSADYGQIDYTLLLFKCIS 98
           +H   LLQ +CQN  HL QIQA L TSSLF+NP  +  IL  ++    + YT ++F+ I+
Sbjct: 41  SHFEALLQNSCQNARHLLQIQALLVTSSLFRNPYLARTILSRASHLCDVAYTRVIFRSIN 100

Query: 97  FPDTFCYNVVVKACALSCVPHKAVLFYF 14
             DTFC N+V++A + S  P +A++FYF
Sbjct: 101 SLDTFCVNIVIQAYSNSHAPREAIVFYF 128


>ref|XP_003612228.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513563|gb|AES95186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 665

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 44/105 (41%), Positives = 62/105 (59%), Gaps = 8/105 (7%)
 Frame = -2

Query: 292 NTTPSINHLLHL-----LQT--CQNMTHLYQIQAHLTTSSLFQNPSFSARILKLSADYGQ 134
           +++PS   L HL     LQ   CQ   HL QIQ+ L TSS ++NP  S  +L  +++   
Sbjct: 26  SSSPSSQFLTHLHFQSLLQPSHCQTTHHLLQIQSLLITSSFYRNPFLSRTLLSRASNLCT 85

Query: 133 IDYTLLLFKCISFP-DTFCYNVVVKACALSCVPHKAVLFYFVMLK 2
           +D+T L+F   + P DTFC N V+ +   S VPHKA++FYF  LK
Sbjct: 86  VDFTFLIFHHFNNPLDTFCVNTVINSYCNSYVPHKAIVFYFSSLK 130


Top