BLASTX nr result

ID: Angelica23_contig00023968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023968
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568113.1| Isocitrate dehydrogenase [NAD] catalytic subuni...    57   2e-06
emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Ar...    55   8e-06

>ref|NP_568113.1| Isocitrate dehydrogenase [NAD] catalytic subunit 5 [Arabidopsis
           thaliana] gi|75249591|sp|Q945K7.1|IDH5_ARATH RecName:
           Full=Isocitrate dehydrogenase [NAD] catalytic subunit 5,
           mitochondrial; AltName: Full=IDH-V; AltName:
           Full=Isocitric dehydrogenase 5; AltName:
           Full=NAD(+)-specific ICDH 5; Flags: Precursor
           gi|15724320|gb|AAL06553.1|AF412100_1 W25EPL23M/W25EPL23M
           [Arabidopsis thaliana] gi|20466714|gb|AAM20674.1|
           putative protein [Arabidopsis thaliana]
           gi|30725594|gb|AAP37819.1| At5g03290 [Arabidopsis
           thaliana] gi|332003198|gb|AED90581.1| Isocitrate
           dehydrogenase [NAD] catalytic subunit 5 [Arabidopsis
           thaliana]
          Length = 374

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/68 (48%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
 Frame = -1

Query: 191 TMASGIVKRLLGNRANGIXXXXXXXXXXXXXXXSDL------ITATLFPGDGIGPEIAES 30
           TMA+ + +RL+GNR+  I                        ITATLFPGDGIGPEIAES
Sbjct: 2   TMAANLARRLIGNRSTQILGAVNSSSGAASSVARAFCSSTTPITATLFPGDGIGPEIAES 61

Query: 29  VKEVFRTA 6
           VK+VF TA
Sbjct: 62  VKKVFTTA 69


>emb|CAB83285.1| 3-isopropylmalate dehydrogenase-like protein [Arabidopsis thaliana]
           gi|9757780|dbj|BAB08389.1| 3-isopropylmalate
           dehydrogenase [Arabidopsis thaliana]
          Length = 372

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 6/67 (8%)
 Frame = -1

Query: 188 MASGIVKRLLGNRANGIXXXXXXXXXXXXXXXSDL------ITATLFPGDGIGPEIAESV 27
           MA+ + +RL+GNR+  I                        ITATLFPGDGIGPEIAESV
Sbjct: 1   MAANLARRLIGNRSTQILGAVNSSSGAASSVARAFCSSTTPITATLFPGDGIGPEIAESV 60

Query: 26  KEVFRTA 6
           K+VF TA
Sbjct: 61  KKVFTTA 67


Top