BLASTX nr result

ID: Angelica23_contig00023952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023952
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525657.1| Omega-3 fatty acid desaturase, endoplasmic r...   191   8e-47
ref|XP_002298309.1| predicted protein [Populus trichocarpa] gi|2...   187   7e-46
gb|ABD48788.1| endoplasmic reticulum 18:2 desaturase [Populus to...   187   7e-46
gb|ABX82798.1| microsomal omega-3 fatty acid desaturase [Jatroph...   186   2e-45
ref|NP_001233791.1| omega-3 fatty acid desaturase [Solanum lycop...   185   3e-45

>ref|XP_002525657.1| Omega-3 fatty acid desaturase, endoplasmic reticulum, putative
           [Ricinus communis] gi|223535093|gb|EEF36775.1| Omega-3
           fatty acid desaturase, endoplasmic reticulum, putative
           [Ricinus communis]
          Length = 506

 Score =  191 bits (484), Expect = 8e-47
 Identities = 80/123 (65%), Positives = 100/123 (81%)
 Frame = +1

Query: 166 MDGDAALTSAANPPFKIADIRAAVPKHCWIKNPWRSLSHVLRDFILAFGLMAMAVYIDSW 345
           +DGDA    +  PPFKIA+IRAA+PKHCWIKNPWRSLS+VLRD  +   L A A+++DSW
Sbjct: 72  LDGDADFDPSDPPPFKIAEIRAAIPKHCWIKNPWRSLSYVLRDAFVVLALAAAALFLDSW 131

Query: 346 SFWPLYWTAQGSVFMGLFVIGHDCGHGSFSDYCMLNNVMGHVLLTFVLTPFHGFRIGHRT 525
            FWPLYW AQG++F  +FV+GHDCGHGSFSD  +LNNV+GH+L + +L P+HG+RI HRT
Sbjct: 132 CFWPLYWAAQGTMFWAIFVLGHDCGHGSFSDSTLLNNVVGHLLHSSILVPYHGWRISHRT 191

Query: 526 HHQ 534
           HHQ
Sbjct: 192 HHQ 194


>ref|XP_002298309.1| predicted protein [Populus trichocarpa] gi|222845567|gb|EEE83114.1|
           predicted protein [Populus trichocarpa]
          Length = 383

 Score =  187 bits (476), Expect = 7e-46
 Identities = 79/123 (64%), Positives = 100/123 (81%)
 Frame = +1

Query: 166 MDGDAALTSAANPPFKIADIRAAVPKHCWIKNPWRSLSHVLRDFILAFGLMAMAVYIDSW 345
           +DG+     +A PPFKIA+IRAA+PKHCW+KNPWRSLS+VLRD  + F L A A+ +DSW
Sbjct: 22  IDGEGDFDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDVTVVFALAAAALRLDSW 81

Query: 346 SFWPLYWTAQGSVFMGLFVIGHDCGHGSFSDYCMLNNVMGHVLLTFVLTPFHGFRIGHRT 525
            FWPLYW AQG++F  +FV+GHDCGHGSFS+  +LNNV+GHVL + +L P+HG+RI HRT
Sbjct: 82  VFWPLYWAAQGTMFWAIFVLGHDCGHGSFSNNHLLNNVVGHVLHSSILVPYHGWRISHRT 141

Query: 526 HHQ 534
           HHQ
Sbjct: 142 HHQ 144


>gb|ABD48788.1| endoplasmic reticulum 18:2 desaturase [Populus tomentosa]
          Length = 383

 Score =  187 bits (476), Expect = 7e-46
 Identities = 78/123 (63%), Positives = 100/123 (81%)
 Frame = +1

Query: 166 MDGDAALTSAANPPFKIADIRAAVPKHCWIKNPWRSLSHVLRDFILAFGLMAMAVYIDSW 345
           +DG+     +A PPFKIA+IRAA+PKHCW+KNPWRSLS+VLRD  + F L A A+ +DSW
Sbjct: 22  IDGEGDFDPSAPPPFKIAEIRAAIPKHCWVKNPWRSLSYVLRDVAIVFALAAAALRLDSW 81

Query: 346 SFWPLYWTAQGSVFMGLFVIGHDCGHGSFSDYCMLNNVMGHVLLTFVLTPFHGFRIGHRT 525
            FWPLYW AQG++F  +FV+GHDCGHGSFS+  +LNNV+GH+L + +L P+HG+RI HRT
Sbjct: 82  IFWPLYWAAQGTMFWAIFVLGHDCGHGSFSNNHLLNNVVGHILHSSILVPYHGWRISHRT 141

Query: 526 HHQ 534
           HHQ
Sbjct: 142 HHQ 144


>gb|ABX82798.1| microsomal omega-3 fatty acid desaturase [Jatropha curcas]
          Length = 377

 Score =  186 bits (472), Expect = 2e-45
 Identities = 77/115 (66%), Positives = 96/115 (83%)
 Frame = +1

Query: 190 SAANPPFKIADIRAAVPKHCWIKNPWRSLSHVLRDFILAFGLMAMAVYIDSWSFWPLYWT 369
           S+  PPFKIADIRAA+PKHCW+KNPWRSLS+VLRD ++ F L+A A Y +SW FWPLYW 
Sbjct: 21  SSNPPPFKIADIRAAIPKHCWVKNPWRSLSYVLRDIVVVFALVAAAFYFNSWLFWPLYWA 80

Query: 370 AQGSVFMGLFVIGHDCGHGSFSDYCMLNNVMGHVLLTFVLTPFHGFRIGHRTHHQ 534
           AQG++F  +FV+GHDCGHGSFS+   LNNV+GH+L + +L P+HG+RI HRTHHQ
Sbjct: 81  AQGTMFWAIFVLGHDCGHGSFSNNSTLNNVVGHILHSSILVPYHGWRISHRTHHQ 135


>ref|NP_001233791.1| omega-3 fatty acid desaturase [Solanum lycopersicum]
           gi|160334210|gb|ABX24525.1| omega-3 fatty acid
           desaturase [Solanum lycopersicum]
          Length = 377

 Score =  185 bits (470), Expect = 3e-45
 Identities = 72/115 (62%), Positives = 98/115 (85%)
 Frame = +1

Query: 190 SAANPPFKIADIRAAVPKHCWIKNPWRSLSHVLRDFILAFGLMAMAVYIDSWSFWPLYWT 369
           S+A PPFK+++IRAA+PKHCWIKNPW+SLS+VLRD ++ F L+ MA+Y D+W FWP+YW 
Sbjct: 21  SSALPPFKLSEIRAAIPKHCWIKNPWKSLSYVLRDVVIVFALVTMAIYFDNWKFWPIYWV 80

Query: 370 AQGSVFMGLFVIGHDCGHGSFSDYCMLNNVMGHVLLTFVLTPFHGFRIGHRTHHQ 534
            QG++F  +FV+GHDCGHGSFSD  +LN+V+GH+L +F+L P+HG+RI H+TH Q
Sbjct: 81  LQGTMFWAIFVLGHDCGHGSFSDSALLNSVVGHILHSFILVPYHGWRISHKTHRQ 135


Top