BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023945
         (648 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   166   3e-39
emb|CBI34757.3| unnamed protein product [Vitis vinifera]              164   1e-38
ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D sub...   154   1e-35
ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocar...   142   5e-32
gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycope...   127   2e-27

>ref|XP_002275898.2| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Vitis vinifera]
          Length = 1560

 Score =  166 bits (421), Expect = 3e-39
 Identities = 92/199 (46%), Positives = 120/199 (60%), Gaps = 21/199 (10%)
 Frame = +2

Query: 5    PSLGTGAQFDILYSGKGHEVDKPEDIYNLLGSQVSANDQ--KVNAP-------------- 136
            PS+G+G  FDILYS KGHE+ +PEDIY LLGSQ S ++Q  KV  P              
Sbjct: 1294 PSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQL 1353

Query: 137  ----REFSNISIKSLAKKSEFLRKNFKATHFIW-MSKELRHILQKYKINQQLKELDEAIA 301
                 + ++   KSL K S+ + ++F + + I  +S+ L+ ILQKY IN QL E+D+   
Sbjct: 1354 VYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTL 1413

Query: 302  AAALFFHPRSSEKIGCGLQGIKIGLSLKDSSSRCFQLMRTDGTVEEFSYHKCMHNALNLT 481
              AL+FHPR  EKIG G Q IK+    K  ++RCF L+RTDGT E+FSYHKC+H AL + 
Sbjct: 1414 MMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEII 1473

Query: 482  APTSAEKYQSMWLNGRESS 538
             P  A  YQS WL    SS
Sbjct: 1474 DPRRARSYQSRWLTSEVSS 1492


>emb|CBI34757.3| unnamed protein product [Vitis vinifera]
          Length = 1359

 Score =  164 bits (415), Expect = 1e-38
 Identities = 90/193 (46%), Positives = 118/193 (61%), Gaps = 21/193 (10%)
 Frame = +2

Query: 5    PSLGTGAQFDILYSGKGHEVDKPEDIYNLLGSQVSANDQ--KVNAP-------------- 136
            PS+G+G  FDILYS KGHE+ +PEDIY LLGSQ S ++Q  KV  P              
Sbjct: 1152 PSVGSGGHFDILYSAKGHELARPEDIYKLLGSQTSCHEQNLKVKVPITCYQTTTKCGAQL 1211

Query: 137  ----REFSNISIKSLAKKSEFLRKNFKATHFIW-MSKELRHILQKYKINQQLKELDEAIA 301
                 + ++   KSL K S+ + ++F + + I  +S+ L+ ILQKY IN QL E+D+   
Sbjct: 1212 VYANGDSASKGCKSLEKISKSVLRSFLSLNDIQKLSRRLKFILQKYPINHQLSEIDKTTL 1271

Query: 302  AAALFFHPRSSEKIGCGLQGIKIGLSLKDSSSRCFQLMRTDGTVEEFSYHKCMHNALNLT 481
              AL+FHPR  EKIG G Q IK+    K  ++RCF L+RTDGT E+FSYHKC+H AL + 
Sbjct: 1272 MMALYFHPRRDEKIGPGAQNIKVRYHSKYHNTRCFSLVRTDGTEEDFSYHKCVHGALEII 1331

Query: 482  APTSAEKYQSMWL 520
             P  A  YQS WL
Sbjct: 1332 DPRRARSYQSRWL 1344


>ref|XP_004147993.1| PREDICTED: DNA-directed RNA polymerase D subunit 1-like [Cucumis
            sativus] gi|449494342|ref|XP_004159519.1| PREDICTED: LOW
            QUALITY PROTEIN: DNA-directed RNA polymerase D subunit
            1-like [Cucumis sativus]
          Length = 1469

 Score =  154 bits (390), Expect = 1e-35
 Identities = 86/192 (44%), Positives = 111/192 (57%), Gaps = 20/192 (10%)
 Frame = +2

Query: 5    PSLGTGAQFDILYSGKGHEVDKPEDIYNLLGSQVSANDQ--------------KVNAPRE 142
            PSLGTG QFDILYSGKGHE++KP D+YNLLG Q +   Q              K +A   
Sbjct: 1273 PSLGTGGQFDILYSGKGHELNKPVDVYNLLGGQSTCEKQNTKIESLDKNTISEKYSAQLM 1332

Query: 143  FSN--ISIKSLAK----KSEFLRKNFKATHFIWMSKELRHILQKYKINQQLKELDEAIAA 304
              N   +IK L +        LRK         +S  LR IL KY +N++L E+D++   
Sbjct: 1333 LKNGGSTIKGLKRLDSVSKSILRKFLTLNDIQKLSFALRTILHKYSLNERLNEVDKSTLM 1392

Query: 305  AALFFHPRSSEKIGCGLQGIKIGLSLKDSSSRCFQLMRTDGTVEEFSYHKCMHNALNLTA 484
             AL+FHP   EKIG G Q IK+G   K  ++RCF L+R+DGT E+FSYHKC+  AL + A
Sbjct: 1393 MALYFHPHRDEKIGVGAQDIKVGSHSKYQNTRCFVLIRSDGTTEDFSYHKCVLGALEIIA 1452

Query: 485  PTSAEKYQSMWL 520
            P   + YQS W+
Sbjct: 1453 PHRVKGYQSKWM 1464


>ref|XP_002298071.1| RNA polymerase IV subunit [Populus trichocarpa]
            gi|222845329|gb|EEE82876.1| RNA polymerase IV subunit
            [Populus trichocarpa]
          Length = 1517

 Score =  142 bits (358), Expect = 5e-32
 Identities = 80/199 (40%), Positives = 110/199 (55%), Gaps = 21/199 (10%)
 Frame = +2

Query: 5    PSLGTGAQFDILYSGKGHEVDKPEDIYNLLGSQVSANDQKVNAP---------------- 136
            P++GTG QFDI+YSGKG E  KP D+YNLLGSQ+ + +Q                     
Sbjct: 1307 PAIGTG-QFDIVYSGKGLEFSKPVDVYNLLGSQMISTEQNTEFGVLDAQIYKSDKCGAQF 1365

Query: 137  -REFSNISIKSLAKKS----EFLRKNFKATHFIWMSKELRHILQKYKINQQLKELDEAIA 301
              +F     K    K      FLR+         MS  +R IL KY ++QQL E D+++ 
Sbjct: 1366 LHKFGGCGPKGFKVKEGIPRSFLRRLLTYDDIQRMSYTVRKILNKYSVDQQLNESDKSVL 1425

Query: 302  AAALFFHPRSSEKIGCGLQGIKIGLSLKDSSSRCFQLMRTDGTVEEFSYHKCMHNALNLT 481
               L+FHPR  EKIG G + IK+    +   +RCF L+RTDGT+E+FSY KC+HNAL + 
Sbjct: 1426 MMTLYFHPRRDEKIGIGAKDIKVINHPEYQDTRCFSLVRTDGTIEDFSYRKCLHNALEII 1485

Query: 482  APTSAEKYQSMWLNGRESS 538
            AP  A++Y   +L  + S+
Sbjct: 1486 APQRAKRYCEKYLTSKVSA 1504


>gb|AAY89360.1| RNA polymerase IV largest subunit [Solanum lycopersicum]
          Length = 1138

 Score =  127 bits (318), Expect = 2e-27
 Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 19/194 (9%)
 Frame = +2

Query: 2    SPSLGTGAQFDILYSGKGHEVDKPEDIYNLLGSQVSANDQKVNAPR-------------- 139
            +PS+GTG+ FDI+YSGKG+E+ +  ++Y LL + V+ +   V                  
Sbjct: 944  TPSIGTGSSFDIMYSGKGYELAEQINVYTLLRNLVTVDTPNVKVTLGKDGGMDGMSLVRR 1003

Query: 140  --EFSNISIKSLAKKSEF--LRKNFKATHFIWMSKELRHILQKYKINQQLKELDEAIAAA 307
                 ++  KS   +  F  LR  F       +S+ L+ +L KY I ++L E D+ +A  
Sbjct: 1004 LDRLDDLDKKSCKSELSFTKLRSYFSFNDIKKLSQSLKQMLSKYDIGRELNEADKCLAMM 1063

Query: 308  ALFFHPRSSEKIGCGL-QGIKIGLSLKDSSSRCFQLMRTDGTVEEFSYHKCMHNALNLTA 484
            AL FHPR +EKIG G  + IKIG   +   SRCF ++R+D TVE+FSY KCM +AL L A
Sbjct: 1064 ALQFHPRRNEKIGKGAPKEIKIGYHQEFEGSRCFMVVRSDDTVEDFSYRKCMQHALELIA 1123

Query: 485  PTSAEKYQSMWLNG 526
            P  A+   S WLNG
Sbjct: 1124 PQKAK--TSRWLNG 1135