BLASTX nr result

ID: Angelica23_contig00023846 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023846
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABR13296.1| unknown protein [Prunus dulcis]                         64   2e-08
ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chlo...    63   3e-08

>gb|ABR13296.1| unknown protein [Prunus dulcis]
          Length = 97

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/52 (61%), Positives = 39/52 (75%)
 Frame = +1

Query: 172 IFISYGSMFNSFKVIGSFHAFKNPLPFSAPSRKVNRTNLVTFS*VFLLKLGN 327
           IF SYGS FNSF+VIGSF +F+N  P+S P R+V RTN VTFS  F+  LG+
Sbjct: 3   IFTSYGSSFNSFEVIGSFSSFENLFPYSTPFRRVTRTNSVTFS--FIWNLGS 52


>ref|XP_004174176.1| PREDICTED: 30S ribosomal protein S12-B, chloroplastic-like [Cucumis
           sativus]
          Length = 117

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 34/54 (62%), Positives = 39/54 (72%)
 Frame = -2

Query: 299 ENVTKLVLFTFRDGAEKGRGFLNA*KDPMTLKELNMEPYEMKIEIFGTILDSGN 138
           ENVT+LV  T RDG E+GR F N  KDPMT KELN EPYE+KI    T+L SG+
Sbjct: 3   ENVTELVPVTLRDGMEEGRRFSNEEKDPMTSKELNEEPYEVKIS--RTVLSSGS 54


Top