BLASTX nr result

ID: Angelica23_contig00023769 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023769
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helica...   115   4e-24
emb|CBI15516.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinu...   106   2e-21
ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helica...   106   2e-21
ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20

>ref|XP_002277625.2| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Vitis
           vinifera]
          Length = 1178

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/117 (50%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = +3

Query: 6   LKKYIVKKSMNKDFVQDTSILRSSTGGNLAINQQ-IYEQEEPIKRTSPGAERILQRRSLE 182
           LK+Y+ +KSM+++   D ++ RS   GN ++ ++  YEQ+EP+ +TS   ERIL+R+SL+
Sbjct: 201 LKEYLSQKSMSRESFSDKTLSRSI--GNSSVTEEGFYEQQEPLTQTSVVMERILKRKSLQ 258

Query: 183 ILNKQQSWQNSLEGQKMQEFRKTLPAYKEKDSXXXXXXXXXXXXXSGETGCGKTTQL 353
           I N+QQ WQ S EGQKMQEFR++LPAYKE+++             SGETGCGKTTQL
Sbjct: 259 IRNQQQDWQESSEGQKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQL 315


>emb|CBI15516.3| unnamed protein product [Vitis vinifera]
          Length = 1057

 Score =  115 bits (288), Expect = 4e-24
 Identities = 59/117 (50%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = +3

Query: 6   LKKYIVKKSMNKDFVQDTSILRSSTGGNLAINQQ-IYEQEEPIKRTSPGAERILQRRSLE 182
           LK+Y+ +KSM+++   D ++ RS   GN ++ ++  YEQ+EP+ +TS   ERIL+R+SL+
Sbjct: 80  LKEYLSQKSMSRESFSDKTLSRSI--GNSSVTEEGFYEQQEPLTQTSVVMERILKRKSLQ 137

Query: 183 ILNKQQSWQNSLEGQKMQEFRKTLPAYKEKDSXXXXXXXXXXXXXSGETGCGKTTQL 353
           I N+QQ WQ S EGQKMQEFR++LPAYKE+++             SGETGCGKTTQL
Sbjct: 138 IRNQQQDWQESSEGQKMQEFRRSLPAYKEREALLNAISQNQVVVVSGETGCGKTTQL 194


>ref|XP_002520424.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223540409|gb|EEF41979.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 1058

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/116 (45%), Positives = 75/116 (64%)
 Frame = +3

Query: 6   LKKYIVKKSMNKDFVQDTSILRSSTGGNLAINQQIYEQEEPIKRTSPGAERILQRRSLEI 185
           L  Y+ KKS N++      + +SS G ++A  + +YEQ +P+ + +   ERIL+R+SL++
Sbjct: 117 LNAYLSKKSTNRENFSVNFLPKSSNGKSMANTEGVYEQPDPMIKNNVVMERILRRKSLQL 176

Query: 186 LNKQQSWQNSLEGQKMQEFRKTLPAYKEKDSXXXXXXXXXXXXXSGETGCGKTTQL 353
             KQQ WQ + EGQKM EFR++LPAYKE+D+             SGETGCGKTTQL
Sbjct: 177 QTKQQEWQETPEGQKMAEFRQSLPAYKERDALLKAISENQVVVVSGETGCGKTTQL 232


>ref|XP_003524350.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
           max]
          Length = 1180

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/117 (47%), Positives = 79/117 (67%), Gaps = 1/117 (0%)
 Frame = +3

Query: 6   LKKYIVKKSMNK-DFVQDTSILRSSTGGNLAINQQIYEQEEPIKRTSPGAERILQRRSLE 182
           L  ++ +K+ NK DF++D S+  SS   ++  N+++YEQ EP+   S   E+ILQR+SL+
Sbjct: 200 LLAHLSQKARNKWDFMED-SLHNSSDSRSIPANERMYEQPEPVTHNSVVKEKILQRKSLQ 258

Query: 183 ILNKQQSWQNSLEGQKMQEFRKTLPAYKEKDSXXXXXXXXXXXXXSGETGCGKTTQL 353
           + ++QQ WQ S EGQKM EFR++LPA+KEKD+             SGETGCGKTTQL
Sbjct: 259 LHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLRVISQSQVVVVSGETGCGKTTQL 315


>ref|XP_002321501.1| predicted protein [Populus trichocarpa] gi|222868497|gb|EEF05628.1|
           predicted protein [Populus trichocarpa]
          Length = 1062

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/115 (46%), Positives = 72/115 (62%)
 Frame = +3

Query: 9   KKYIVKKSMNKDFVQDTSILRSSTGGNLAINQQIYEQEEPIKRTSPGAERILQRRSLEIL 188
           K YI KK  ++      S+ RS+ G ++  +++IYE+ E   + S   ERIL R+SL++ 
Sbjct: 81  KAYISKKPTSRGLFPPNSLSRSNGGRSMDTDERIYERPELSVQNSVAMERILSRKSLQLR 140

Query: 189 NKQQSWQNSLEGQKMQEFRKTLPAYKEKDSXXXXXXXXXXXXXSGETGCGKTTQL 353
           N+Q+ WQ S EGQKM EFR++LPAYKEKD              SGETGCGKTTQL
Sbjct: 141 NQQEKWQESPEGQKMIEFRRSLPAYKEKDVLLKAISENQVIVVSGETGCGKTTQL 195


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