BLASTX nr result

ID: Angelica23_contig00023679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023679
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520729.1| conserved hypothetical protein [Ricinus comm...   142   5e-32
ref|XP_002300839.1| f-box family protein [Populus trichocarpa] g...   135   6e-30
ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...   132   5e-29
emb|CBI28700.3| unnamed protein product [Vitis vinifera]              132   5e-29

>ref|XP_002520729.1| conserved hypothetical protein [Ricinus communis]
           gi|223540114|gb|EEF41691.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 515

 Score =  142 bits (357), Expect = 5e-32
 Identities = 66/110 (60%), Positives = 86/110 (78%)
 Frame = -1

Query: 331 LVESSPSDEAQCEMIEQAIRIGGVLVEAGLRATRKRDAEHNSRVWPLNSDLTVNVFFWLD 152
           L+ESSP D  Q  +I++A+++G +L+EAG R++RKR ++HNS  W L  DLT+ VF  LD
Sbjct: 59  LLESSPCDSDQSVLIDRALKLGSILLEAGNRSSRKRSSKHNSLTWVLPPDLTIKVFSMLD 118

Query: 151 TRSVCYAAATCNFFRRCTTDPLCYARINLLTAVPKVDNLVVSTMIQRAGK 2
           T+S+CYAAATC+ F +C  DPLCYA I+L T VPKV+N VVSTMIQRAGK
Sbjct: 119 TQSLCYAAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGK 168


>ref|XP_002300839.1| f-box family protein [Populus trichocarpa]
           gi|222842565|gb|EEE80112.1| f-box family protein
           [Populus trichocarpa]
          Length = 471

 Score =  135 bits (339), Expect = 6e-30
 Identities = 64/110 (58%), Positives = 83/110 (75%)
 Frame = -1

Query: 331 LVESSPSDEAQCEMIEQAIRIGGVLVEAGLRATRKRDAEHNSRVWPLNSDLTVNVFFWLD 152
           L+ESSP D  +  +I++A+++G +L+EAG R+ RKR + HNS  W L  DLT+ V   LD
Sbjct: 49  LLESSPCDADKSLLIDRALKLGSLLLEAGKRSARKRSSVHNSLTWALPPDLTIKVLSMLD 108

Query: 151 TRSVCYAAATCNFFRRCTTDPLCYARINLLTAVPKVDNLVVSTMIQRAGK 2
           T+S+CYAAATC+ F +C  DPLCYA I+L T VPKV+N VVSTMIQRAGK
Sbjct: 109 TQSLCYAAATCSMFYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGK 158


>ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|222857036|gb|EEE94583.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  134 bits (336), Expect = 1e-29
 Identities = 63/110 (57%), Positives = 83/110 (75%)
 Frame = -1

Query: 331 LVESSPSDEAQCEMIEQAIRIGGVLVEAGLRATRKRDAEHNSRVWPLNSDLTVNVFFWLD 152
           L++SSP D  Q  +I++A+++G +L+EAG R+ RKR + HNS  W L  DLT+ +F  LD
Sbjct: 64  LLDSSPCDADQSLLIDRALKLGSLLLEAGNRSARKRSSFHNSLTWALPPDLTIKLFSMLD 123

Query: 151 TRSVCYAAATCNFFRRCTTDPLCYARINLLTAVPKVDNLVVSTMIQRAGK 2
            +S+CYAAATC+ F +C  DPLCYA I+L T VPKV+N VVSTMIQRAGK
Sbjct: 124 AQSLCYAAATCSMFYKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGK 173


>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score =  132 bits (331), Expect = 5e-29
 Identities = 63/111 (56%), Positives = 81/111 (72%)
 Frame = -1

Query: 334 RLVESSPSDEAQCEMIEQAIRIGGVLVEAGLRATRKRDAEHNSRVWPLNSDLTVNVFFWL 155
           +L++S   D  Q  +I++A+R+G  L+EAG R+ RKR + HNS  W L  DLT+ VF  L
Sbjct: 64  KLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSML 123

Query: 154 DTRSVCYAAATCNFFRRCTTDPLCYARINLLTAVPKVDNLVVSTMIQRAGK 2
           DT+S+CY AATC+ F +C  DPLCYA I+L T VPKV+N VVSTMIQRAGK
Sbjct: 124 DTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGK 174


>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  132 bits (331), Expect = 5e-29
 Identities = 63/111 (56%), Positives = 81/111 (72%)
 Frame = -1

Query: 334 RLVESSPSDEAQCEMIEQAIRIGGVLVEAGLRATRKRDAEHNSRVWPLNSDLTVNVFFWL 155
           +L++S   D  Q  +I++A+R+G  L+EAG R+ RKR + HNS  W L  DLT+ VF  L
Sbjct: 64  KLLDSRACDSDQNLLIDRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSML 123

Query: 154 DTRSVCYAAATCNFFRRCTTDPLCYARINLLTAVPKVDNLVVSTMIQRAGK 2
           DT+S+CY AATC+ F +C  DPLCYA I+L T VPKV+N VVSTMIQRAGK
Sbjct: 124 DTQSLCYTAATCSMFHKCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGK 174


Top