BLASTX nr result

ID: Angelica23_contig00023654 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023654
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-...   109   2e-22
ref|XP_003528124.1| PREDICTED: lysine-specific demethylase REF6-...   105   4e-21
emb|CBI14884.3| unnamed protein product [Vitis vinifera]              100   1e-19
ref|XP_002275305.1| PREDICTED: lysine-specific demethylase REF6-...   100   1e-19
ref|XP_003638525.1| Lysine-specific demethylase 5B [Medicago tru...    96   4e-18

>ref|XP_003528125.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1565

 Score =  109 bits (273), Expect = 2e-22
 Identities = 70/169 (41%), Positives = 95/169 (56%), Gaps = 3/169 (1%)
 Frame = +3

Query: 3   VSHFQXXXXXXXXXXXXVPMTTVPEPRSSRLKDKKKGEGETLVKELFFQDVIQNIELLNT 182
           VSHFQ            +P     EPRSSRLKDKKKGEGET++KELF QDV+QN +LL+ 
Sbjct: 357 VSHFQLLYDLALALCSRIPAGISAEPRSSRLKDKKKGEGETVIKELFVQDVLQNNDLLHF 416

Query: 183 LGKGSPIVLLPRDSINNSIQTKLRAGYLTKANSDRSLGLCSSSTNGKMKILNDIKLDRK- 359
           LG+GS +VLLP  S++ S+ +KLR G     N   S G+ SS    K  + +D+  +R  
Sbjct: 417 LGQGSAVVLLPHSSVDISVCSKLRVGSQQSINLSNSEGMHSS----KGFVSDDLAFNRSH 472

Query: 360 --KRSKGPYLMKGKFPKSSGGSRLPLFGGSNGDSCASPYENVKIDTEGE 500
             K+ K  Y +K KF      + +  F   NG+   S +  ++ DTE E
Sbjct: 473 GIKQGKSFYFVKDKFTTLCERNMISSF-DVNGNISISSFNPLQRDTERE 520


>ref|XP_003528124.1| PREDICTED: lysine-specific demethylase REF6-like [Glycine max]
          Length = 1586

 Score =  105 bits (262), Expect = 4e-21
 Identities = 68/157 (43%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
 Frame = +3

Query: 3   VSHFQXXXXXXXXXXXXVPMTTVPEPRSSRLKDKKKGEGETLVKELFFQDVIQNIELLNT 182
           VSHFQ            +P++   EPRSSRLKDKK GEGET+ KELF QDV+QN +LL+ 
Sbjct: 357 VSHFQLLYDLALALCSRIPVSISAEPRSSRLKDKK-GEGETVTKELFVQDVLQNNDLLHI 415

Query: 183 LGKGSPIVLLPRDSINNSIQTKLRAGYLTKANSDRSLGLCSSSTNGKMKILNDIKLDRK- 359
           LGKGS +VLLPR S++ S+ +KLR G     N   S G+ SS    K  + +D+  +R  
Sbjct: 416 LGKGSDVVLLPRSSVDISVCSKLRVGSQQSINVRNSEGMHSS----KGFVSDDLVFNRSP 471

Query: 360 --KRSKGPYLMKGKFPKSSGGSRLPLFGGSNGDSCAS 464
             K+ K  Y +K KF      +R+  F  +   S AS
Sbjct: 472 GIKQEKSFYFVKDKFTTLCERNRISTFNVNGNISTAS 508


>emb|CBI14884.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/101 (52%), Positives = 68/101 (67%)
 Frame = +3

Query: 3   VSHFQXXXXXXXXXXXXVPMTTVPEPRSSRLKDKKKGEGETLVKELFFQDVIQNIELLNT 182
           VSHFQ            +PM+   EPRSSRLKDKK+GEGET+VKELF Q+++QN +LL+ 
Sbjct: 170 VSHFQLLYDLALALCSRIPMSISVEPRSSRLKDKKRGEGETVVKELFVQNIMQNNDLLHI 229

Query: 183 LGKGSPIVLLPRDSINNSIQTKLRAGYLTKANSDRSLGLCS 305
           LGKGS IVLLP+ S + S+   LR G  ++     SLGLC+
Sbjct: 230 LGKGSSIVLLPKRSSDISVCPNLRVGSSSRVKPRLSLGLCN 270


>ref|XP_002275305.1| PREDICTED: lysine-specific demethylase REF6-like [Vitis vinifera]
          Length = 1295

 Score =  100 bits (249), Expect = 1e-19
 Identities = 53/101 (52%), Positives = 68/101 (67%)
 Frame = +3

Query: 3   VSHFQXXXXXXXXXXXXVPMTTVPEPRSSRLKDKKKGEGETLVKELFFQDVIQNIELLNT 182
           VSHFQ            +PM+   EPRSSRLKDKK+GEGET+VKELF Q+++QN +LL+ 
Sbjct: 368 VSHFQLLYDLALALCSRIPMSISVEPRSSRLKDKKRGEGETVVKELFVQNIMQNNDLLHI 427

Query: 183 LGKGSPIVLLPRDSINNSIQTKLRAGYLTKANSDRSLGLCS 305
           LGKGS IVLLP+ S + S+   LR G  ++     SLGLC+
Sbjct: 428 LGKGSSIVLLPKRSSDISVCPNLRVGSSSRVKPRLSLGLCN 468


>ref|XP_003638525.1| Lysine-specific demethylase 5B [Medicago truncatula]
           gi|355504460|gb|AES85663.1| Lysine-specific demethylase
           5B [Medicago truncatula]
          Length = 1621

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 64/172 (37%), Positives = 93/172 (54%), Gaps = 6/172 (3%)
 Frame = +3

Query: 3   VSHFQXXXXXXXXXXXXVPMTTVPEPRSSRLKDKKKGEGETLVKELFFQDVIQNIELLNT 182
           VSH Q            +P      PRSSRLKDKKKGEGE ++KELF QDV+QN +LL+ 
Sbjct: 387 VSHLQLLYDLALALCSRIPGGISAAPRSSRLKDKKKGEGEAVIKELFVQDVLQNNDLLHV 446

Query: 183 LGKGSPIVLLPRDSINNSIQTKLRAGYL-TKANSDRSLGLCSSS--TNGKMKILNDIKLD 353
           LG  S +VLLPR+S++ S  +KLR G    K N   S  +C+S   ++ K  + +D+  D
Sbjct: 447 LGNESSVVLLPRNSVDISSCSKLRVGCRPPKVNPGFSFDVCNSEGLSSSKGFVSDDLVFD 506

Query: 354 RKK---RSKGPYLMKGKFPKSSGGSRLPLFGGSNGDSCASPYENVKIDTEGE 500
           R +   + K    +  +    S G  +P    +NG+   S  + ++ D+E E
Sbjct: 507 RNRGIAQEKNLCSVNDELTLLSEGKGIPSL-DANGNKSPSSSKQLQRDSESE 557


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