BLASTX nr result

ID: Angelica23_contig00023596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023596
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37456.3| unnamed protein product [Vitis vinifera]              107   1e-21
ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-...   107   1e-21
emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]   107   1e-21
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...   102   4e-20
ref|XP_004173368.1| PREDICTED: replication protein A 70 kDa DNA-...    98   8e-19

>emb|CBI37456.3| unnamed protein product [Vitis vinifera]
          Length = 754

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/100 (52%), Positives = 77/100 (77%), Gaps = 2/100 (2%)
 Frame = -1

Query: 295 MALKLSEGSVHLICNTDSKHVDINPVLQVQDVRIVQTT--NSAAERYRLLLSDGLFTVQG 122
           M + L+EG++ ++C+ D++  D+ PVLQV D+R+V T   +++ ER+R+LLSDG    QG
Sbjct: 1   MGVNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQG 60

Query: 121 MLATQNNDLVKTNRIVKGSVVKLNEFVCNRIQTRVIIIIV 2
           MLATQ N+LVK+ R+ KGSVV+L +FVCN I+ R+IIII+
Sbjct: 61  MLATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIII 100


>ref|XP_002264009.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Vitis vinifera]
          Length = 882

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/100 (52%), Positives = 77/100 (77%), Gaps = 2/100 (2%)
 Frame = -1

Query: 295 MALKLSEGSVHLICNTDSKHVDINPVLQVQDVRIVQTT--NSAAERYRLLLSDGLFTVQG 122
           M + L+EG++ ++C+ D++  D+ PVLQV D+R+V T   +++ ER+R+LLSDG    QG
Sbjct: 1   MGVNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQG 60

Query: 121 MLATQNNDLVKTNRIVKGSVVKLNEFVCNRIQTRVIIIIV 2
           MLATQ N+LVK+ R+ KGSVV+L +FVCN I+ R+IIII+
Sbjct: 61  MLATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIII 100


>emb|CAN82475.1| hypothetical protein VITISV_038295 [Vitis vinifera]
          Length = 882

 Score =  107 bits (266), Expect = 1e-21
 Identities = 52/100 (52%), Positives = 77/100 (77%), Gaps = 2/100 (2%)
 Frame = -1

Query: 295 MALKLSEGSVHLICNTDSKHVDINPVLQVQDVRIVQTT--NSAAERYRLLLSDGLFTVQG 122
           M + L+EG++ ++C+ D++  D+ PVLQV D+R+V T   +++ ER+R+LLSDG    QG
Sbjct: 1   MGVNLTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQG 60

Query: 121 MLATQNNDLVKTNRIVKGSVVKLNEFVCNRIQTRVIIIIV 2
           MLATQ N+LVK+ R+ KGSVV+L +FVCN I+ R+IIII+
Sbjct: 61  MLATQRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIII 100


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
           truncatula] gi|355513943|gb|AES95566.1| Replication
           protein A 70 kDa DNA-binding subunit [Medicago
           truncatula]
          Length = 1723

 Score =  102 bits (253), Expect = 4e-20
 Identities = 53/99 (53%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
 Frame = -1

Query: 295 MALKLSEGSVHLICNTDSKHVDINPVLQVQDVRIVQTT-NSAAERYRLLLSDGLFTVQGM 119
           MA+ L++G++  +C T     D++PVLQV D+++VQ+  NS  ERYR++LSDGL   QGM
Sbjct: 1   MAVNLTQGAIVTMCFTSE---DLHPVLQVIDLKLVQSQQNSGTERYRVVLSDGLHYQQGM 57

Query: 118 LATQNNDLVKTNRIVKGSVVKLNEFVCNRIQTRVIIIIV 2
           LATQ N+LV + R+ KGS+VKL++F+CN +Q R IIIIV
Sbjct: 58  LATQKNELVHSGRLQKGSIVKLSQFICNVVQNRKIIIIV 96


>ref|XP_004173368.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like,
           partial [Cucumis sativus]
          Length = 374

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/101 (47%), Positives = 73/101 (72%), Gaps = 1/101 (0%)
 Frame = -1

Query: 301 SKMALKLSEGSVHLICNTDSKHVDINPVLQVQDVRIVQTTN-SAAERYRLLLSDGLFTVQ 125
           S  + KL+EG+V +IC  +S      P+LQV D+++V T+  S +ER+RLL+SDG    Q
Sbjct: 4   SMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTHFQQ 63

Query: 124 GMLATQNNDLVKTNRIVKGSVVKLNEFVCNRIQTRVIIIIV 2
           GML TQ N+LVK+ ++ KGS+V+L ++VCN +Q R+III++
Sbjct: 64  GMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVI 104


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