BLASTX nr result

ID: Angelica23_contig00023577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023577
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pdb|4B8J|A Chain A, Rimp_alpha1a                                      167   8e-40
pdb|2YNS|A Chain A, Rimp_alpha_b54nls gi|440690544|pdb|2YNS|B Ch...   167   8e-40
gb|AAQ13406.1|AF005265_1 importin [Oryza sativa]                      167   8e-40
gb|EAY73331.1| hypothetical protein OsI_01208 [Oryza sativa Indi...   167   8e-40
ref|NP_001042611.1| Os01g0253300 [Oryza sativa Japonica Group] g...   167   8e-40

>pdb|4B8J|A Chain A, Rimp_alpha1a
          Length = 528

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/100 (81%), Positives = 87/100 (87%)
 Frame = +2

Query: 2   FFRGKPPPSFELMRPALPVLQRLLYSNDEEVLTDACWAFSYLSDGTNDRIQAVIEAGVCQ 181
           F RGKP PSFE  RPALP L RL++SNDEEVLTDACWA SYLSDGTND+IQAVIEAGVC 
Sbjct: 230 FCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCP 289

Query: 182 RLVELLLHPSPTTVSPALRAVGNIATGDDAQTQCIIDNGA 301
           RLVELLLHPSP+ + PALR VGNI TGDDAQTQCIID+ A
Sbjct: 290 RLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQA 329


>pdb|2YNS|A Chain A, Rimp_alpha_b54nls gi|440690544|pdb|2YNS|B Chain B,
           Rimp_alpha_b54nls gi|440690796|pdb|4B8O|A Chain A,
           Rimp_alpha_sv40tagnls gi|440690799|pdb|4B8P|A Chain A,
           Rimp_alpha_a89nls gi|440690800|pdb|4B8P|B Chain B,
           Rimp_alpha_a89nls
          Length = 490

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/100 (81%), Positives = 87/100 (87%)
 Frame = +2

Query: 2   FFRGKPPPSFELMRPALPVLQRLLYSNDEEVLTDACWAFSYLSDGTNDRIQAVIEAGVCQ 181
           F RGKP PSFE  RPALP L RL++SNDEEVLTDACWA SYLSDGTND+IQAVIEAGVC 
Sbjct: 192 FCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCP 251

Query: 182 RLVELLLHPSPTTVSPALRAVGNIATGDDAQTQCIIDNGA 301
           RLVELLLHPSP+ + PALR VGNI TGDDAQTQCIID+ A
Sbjct: 252 RLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQA 291


>gb|AAQ13406.1|AF005265_1 importin [Oryza sativa]
          Length = 526

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/100 (81%), Positives = 87/100 (87%)
 Frame = +2

Query: 2   FFRGKPPPSFELMRPALPVLQRLLYSNDEEVLTDACWAFSYLSDGTNDRIQAVIEAGVCQ 181
           F RGKP PSFE  RPALP L RL++SNDEEVLTDACWA SYLSDGTND+IQAVIEAGVC 
Sbjct: 228 FCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCP 287

Query: 182 RLVELLLHPSPTTVSPALRAVGNIATGDDAQTQCIIDNGA 301
           RLVELLLHPSP+ + PALR VGNI TGDDAQTQCIID+ A
Sbjct: 288 RLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQA 327


>gb|EAY73331.1| hypothetical protein OsI_01208 [Oryza sativa Indica Group]
          Length = 526

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/100 (81%), Positives = 87/100 (87%)
 Frame = +2

Query: 2   FFRGKPPPSFELMRPALPVLQRLLYSNDEEVLTDACWAFSYLSDGTNDRIQAVIEAGVCQ 181
           F RGKP PSFE  RPALP L RL++SNDEEVLTDACWA SYLSDGTND+IQAVIEAGVC 
Sbjct: 228 FCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCP 287

Query: 182 RLVELLLHPSPTTVSPALRAVGNIATGDDAQTQCIIDNGA 301
           RLVELLLHPSP+ + PALR VGNI TGDDAQTQCIID+ A
Sbjct: 288 RLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQA 327


>ref|NP_001042611.1| Os01g0253300 [Oryza sativa Japonica Group]
           gi|62900360|sp|Q71VM4.2|IMA1A_ORYSJ RecName:
           Full=Importin subunit alpha-1a
           gi|3273243|dbj|BAA31165.1| NLS receptor [Oryza sativa]
           gi|3273245|dbj|BAA31166.1| NLS receptor [Oryza sativa
           Japonica Group] gi|6498466|dbj|BAA87855.1| putative
           importin alpha 2 [Oryza sativa Japonica Group]
           gi|113532142|dbj|BAF04525.1| Os01g0253300 [Oryza sativa
           Japonica Group] gi|125569759|gb|EAZ11274.1| hypothetical
           protein OsJ_01128 [Oryza sativa Japonica Group]
           gi|215687001|dbj|BAG90815.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 526

 Score =  167 bits (423), Expect = 8e-40
 Identities = 81/100 (81%), Positives = 87/100 (87%)
 Frame = +2

Query: 2   FFRGKPPPSFELMRPALPVLQRLLYSNDEEVLTDACWAFSYLSDGTNDRIQAVIEAGVCQ 181
           F RGKP PSFE  RPALP L RL++SNDEEVLTDACWA SYLSDGTND+IQAVIEAGVC 
Sbjct: 228 FCRGKPQPSFEQTRPALPALARLIHSNDEEVLTDACWALSYLSDGTNDKIQAVIEAGVCP 287

Query: 182 RLVELLLHPSPTTVSPALRAVGNIATGDDAQTQCIIDNGA 301
           RLVELLLHPSP+ + PALR VGNI TGDDAQTQCIID+ A
Sbjct: 288 RLVELLLHPSPSVLIPALRTVGNIVTGDDAQTQCIIDHQA 327


Top