BLASTX nr result

ID: Angelica23_contig00023470 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023470
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626608.1| Pentatricopeptide repeat-containing protein ...    62   6e-08
emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]    61   1e-07
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...    58   8e-07
ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
emb|CBI38715.3| unnamed protein product [Vitis vinifera]               55   7e-06

>ref|XP_003626608.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87240852|gb|ABD32710.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355501623|gb|AES82826.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 451

 Score = 62.0 bits (149), Expect = 6e-08
 Identities = 28/63 (44%), Positives = 47/63 (74%)
 Frame = +2

Query: 2   PHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYINRNIQTRR 181
           PH +TW  IV ++C  +D V +++ +L+E+LK+EIK  T+IV+AG GLE+Y+ R I+ + 
Sbjct: 390 PHKDTWMIIVPQICEVDDGV-KIDGVLEEVLKIEIKGDTRIVDAGIGLEDYLIRKIRAKS 448

Query: 182 KKF 190
           ++F
Sbjct: 449 RQF 451


>emb|CAN72416.1| hypothetical protein VITISV_027905 [Vitis vinifera]
          Length = 422

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 27/61 (44%), Positives = 44/61 (72%)
 Frame = +2

Query: 5   HVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYINRNIQTRRK 184
           H  TW  I+ R+C   D+++R+E++  E LK+EI P+T++VEAG GLEEY+ R ++ + +
Sbjct: 362 HTETWVAIIPRICEV-DKLVRMENIFDEXLKLEITPNTRLVEAGIGLEEYVIRKVRDKSR 420

Query: 185 K 187
           K
Sbjct: 421 K 421


>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
           vinifera]
          Length = 1105

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 26/52 (50%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   PHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYI 157
           PH  TW  I+ R+C   D+++R+E++  E LK+EI P+T++VEAG GLEEY+
Sbjct: 318 PHTETWVAIIPRICEV-DKLVRMENIFDEALKLEITPNTRLVEAGIGLEEYM 368


>ref|XP_002320901.1| predicted protein [Populus trichocarpa] gi|222861674|gb|EEE99216.1|
           predicted protein [Populus trichocarpa]
          Length = 475

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/63 (41%), Positives = 43/63 (68%)
 Frame = +2

Query: 2   PHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEEYINRNIQTRR 181
           PH  TW  +V+R+C  +D + R+ ++L ++ KVE+K  T+IVEAG GLEEY+ +  Q + 
Sbjct: 414 PHTETWVMMVSRICEVDD-LQRIGEILDKVKKVELKGDTRIVEAGIGLEEYLIKRTQQKA 472

Query: 182 KKF 190
            ++
Sbjct: 473 WRY 475


>emb|CBI38715.3| unnamed protein product [Vitis vinifera]
          Length = 429

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 25/50 (50%), Positives = 37/50 (74%)
 Frame = +2

Query: 2   PHVNTWGEIVTRMCIAEDEVLRVEDMLKEILKVEIKPHTKIVEAGAGLEE 151
           PH  TW  I+ R+C   D+++R+E++  E LK+EI P+T++VEAG GLEE
Sbjct: 334 PHTETWVAIIPRICEV-DKLVRMENIFDEALKLEITPNTRLVEAGIGLEE 382


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