BLASTX nr result

ID: Angelica23_contig00023439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023439
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28010.3| unnamed protein product [Vitis vinifera]               61   1e-07
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme...    61   1e-07
ref|XP_002310025.1| hypothetical protein POPTRDRAFT_562704 [Popu...    59   5e-07
ref|XP_002310027.1| hypothetical protein POPTRDRAFT_562706 [Popu...    56   3e-06

>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
          Length = 929

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/64 (43%), Positives = 45/64 (70%)
 Frame = +1

Query: 28  VQVPLPLRVERMIEKICFEQCQAPPDSDARKILASIGEENSIHMLTIISQRQIKTFSGFI 207
           ++V LP  VE+M+++IC EQ Q PP++  R+ LAS+GEE+++ +L  IS  +I+  S  I
Sbjct: 1   MEVSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKISHLKIRNLSALI 60

Query: 208 KYML 219
            YM+
Sbjct: 61  NYMV 64


>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
           vinifera]
          Length = 943

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/64 (43%), Positives = 45/64 (70%)
 Frame = +1

Query: 28  VQVPLPLRVERMIEKICFEQCQAPPDSDARKILASIGEENSIHMLTIISQRQIKTFSGFI 207
           ++V LP  VE+M+++IC EQ Q PP++  R+ LAS+GEE+++ +L  IS  +I+  S  I
Sbjct: 1   MEVSLPHSVEQMLQRICTEQQQPPPEAHTRRNLASLGEESTLELLRKISHLKIRNLSALI 60

Query: 208 KYML 219
            YM+
Sbjct: 61  NYMV 64


>ref|XP_002310025.1| hypothetical protein POPTRDRAFT_562704 [Populus trichocarpa]
           gi|222852928|gb|EEE90475.1| hypothetical protein
           POPTRDRAFT_562704 [Populus trichocarpa]
          Length = 305

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/71 (43%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
 Frame = +1

Query: 25  DVQVPLPLRVERMIEKICFEQCQAPPDSDARKILASIGEENSIHMLTIISQRQI-KTFSG 201
           D  VPLP  VE +I KIC EQ + P +++ R  LAS+GEE ++++L  IS ++I K+F G
Sbjct: 7   DKIVPLPCVVEELIAKICREQNRRPLETNTRLTLASLGEEVALNILWRISGQEIRKSFDG 66

Query: 202 FIKYMLKDYKP 234
           F+ ++ K + P
Sbjct: 67  FVLHLAKQFSP 77


>ref|XP_002310027.1| hypothetical protein POPTRDRAFT_562706 [Populus trichocarpa]
           gi|222852930|gb|EEE90477.1| hypothetical protein
           POPTRDRAFT_562706 [Populus trichocarpa]
          Length = 216

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/71 (42%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
 Frame = +1

Query: 25  DVQVPLPLRVERMIEKICFEQCQAPPDSDARKILASIGEENSIHMLTIISQRQI-KTFSG 201
           D  VPLP  VE +I KIC E+ + P +++ R  LAS+GEE ++++L  IS  +I K+F G
Sbjct: 7   DKIVPLPCAVEELITKICREKDRRPLETNTRSTLASLGEEVALNILRRISGLEIRKSFDG 66

Query: 202 FIKYMLKDYKP 234
           F+ ++ K   P
Sbjct: 67  FVLHLAKQCSP 77


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