BLASTX nr result
ID: Angelica23_contig00023256
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Angelica23_contig00023256 (366 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif... 65 4e-09 ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g... 57 1e-06 ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein... 55 8e-06 >ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera] gi|147853333|emb|CAN82327.1| hypothetical protein VITISV_041807 [Vitis vinifera] gi|297740788|emb|CBI30970.3| unnamed protein product [Vitis vinifera] Length = 321 Score = 65.5 bits (158), Expect = 4e-09 Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 1/117 (0%) Frame = -3 Query: 349 LKHVVTKAVDLSCGQLVDLDLQIRGHPYNLLRYVFDRSSQLRRLCLFSSCNITSDWXXXX 170 L+ + AVD S GQL+ + + NLL Y+ DRSS +R L L S I+ D Sbjct: 79 LEEMARHAVDRSGGQLLSICIDDFATD-NLLNYIIDRSSHIRHLRLVSCYGISDDGLSEG 137 Query: 169 XXXXXXXXXXXLDCSCHF-KKAIEIAGRCCPLLKSLKLINTLYRRPKMGCDEDALAI 2 L C C F K+ +E G+CCP LKS +L +R P + CDE+ALAI Sbjct: 138 IKRLPLLVEIDL-CYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIECDEEALAI 193 >ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] gi|355482930|gb|AES64133.1| F-box protein SKIP19 [Medicago truncatula] Length = 332 Score = 57.4 bits (137), Expect = 1e-06 Identities = 35/116 (30%), Positives = 58/116 (50%) Frame = -3 Query: 349 LKHVVTKAVDLSCGQLVDLDLQIRGHPYNLLRYVFDRSSQLRRLCLFSSCNITSDWXXXX 170 L+ + +AVD S GQ D++++ G +LLR++ D ++ L+RL L N+T + Sbjct: 84 LEILCQRAVDYSSGQATDINIEYFGTD-DLLRHIADSANHLQRLRLLGCYNVTDEGLCEV 142 Query: 169 XXXXXXXXXXXLDCSCHFKKAIEIAGRCCPLLKSLKLINTLYRRPKMGCDEDALAI 2 + +E GRCCP LK+ K +RRP+M D++A +I Sbjct: 143 AGKLSHLEELDITIHSLSNDPLEAIGRCCPQLKTFKFNIEGFRRPRMEFDDEAFSI 198 >ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis sativus] gi|449490717|ref|XP_004158686.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis sativus] Length = 318 Score = 54.7 bits (130), Expect = 8e-06 Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 1/109 (0%) Frame = -3 Query: 325 VDLSCGQLVDLDLQIRGHPYNLLRYVFDRSSQLRRLCLFSSCNITSDWXXXXXXXXXXXX 146 VDLS G L+D+ ++ +LL Y+ RS++L+RL + + C SD Sbjct: 73 VDLSRGHLIDISIESFATD-SLLLYIARRSNELKRLWI-ADCFCISDMGLIKAASKLPLL 130 Query: 145 XXXLDCSCHF-KKAIEIAGRCCPLLKSLKLINTLYRRPKMGCDEDALAI 2 C F + + GRCCPLLKSLKL M CD +ALAI Sbjct: 131 EQLEIFLCCFDSRTLGTVGRCCPLLKSLKLNQQFCTGKGMECDREALAI 179