BLASTX nr result

ID: Angelica23_contig00023256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023256
         (366 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    65   4e-09
ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula] g...    57   1e-06
ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein...    55   8e-06

>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/117 (38%), Positives = 60/117 (51%), Gaps = 1/117 (0%)
 Frame = -3

Query: 349 LKHVVTKAVDLSCGQLVDLDLQIRGHPYNLLRYVFDRSSQLRRLCLFSSCNITSDWXXXX 170
           L+ +   AVD S GQL+ + +       NLL Y+ DRSS +R L L S   I+ D     
Sbjct: 79  LEEMARHAVDRSGGQLLSICIDDFATD-NLLNYIIDRSSHIRHLRLVSCYGISDDGLSEG 137

Query: 169 XXXXXXXXXXXLDCSCHF-KKAIEIAGRCCPLLKSLKLINTLYRRPKMGCDEDALAI 2
                      L C C F K+ +E  G+CCP LKS +L    +R P + CDE+ALAI
Sbjct: 138 IKRLPLLVEIDL-CYCSFSKEVLEAIGQCCPRLKSFRLNCQGFRHPHIECDEEALAI 193


>ref|XP_003593882.1| F-box protein SKIP19 [Medicago truncatula]
           gi|355482930|gb|AES64133.1| F-box protein SKIP19
           [Medicago truncatula]
          Length = 332

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/116 (30%), Positives = 58/116 (50%)
 Frame = -3

Query: 349 LKHVVTKAVDLSCGQLVDLDLQIRGHPYNLLRYVFDRSSQLRRLCLFSSCNITSDWXXXX 170
           L+ +  +AVD S GQ  D++++  G   +LLR++ D ++ L+RL L    N+T +     
Sbjct: 84  LEILCQRAVDYSSGQATDINIEYFGTD-DLLRHIADSANHLQRLRLLGCYNVTDEGLCEV 142

Query: 169 XXXXXXXXXXXLDCSCHFKKAIEIAGRCCPLLKSLKLINTLYRRPKMGCDEDALAI 2
                      +         +E  GRCCP LK+ K     +RRP+M  D++A +I
Sbjct: 143 AGKLSHLEELDITIHSLSNDPLEAIGRCCPQLKTFKFNIEGFRRPRMEFDDEAFSI 198


>ref|XP_004134904.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus] gi|449490717|ref|XP_004158686.1| PREDICTED:
           putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 318

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 39/109 (35%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
 Frame = -3

Query: 325 VDLSCGQLVDLDLQIRGHPYNLLRYVFDRSSQLRRLCLFSSCNITSDWXXXXXXXXXXXX 146
           VDLS G L+D+ ++      +LL Y+  RS++L+RL + + C   SD             
Sbjct: 73  VDLSRGHLIDISIESFATD-SLLLYIARRSNELKRLWI-ADCFCISDMGLIKAASKLPLL 130

Query: 145 XXXLDCSCHF-KKAIEIAGRCCPLLKSLKLINTLYRRPKMGCDEDALAI 2
                  C F  + +   GRCCPLLKSLKL         M CD +ALAI
Sbjct: 131 EQLEIFLCCFDSRTLGTVGRCCPLLKSLKLNQQFCTGKGMECDREALAI 179


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