BLASTX nr result

ID: Angelica23_contig00023252 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023252
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...   102   4e-20
emb|CBI23610.3| unnamed protein product [Vitis vinifera]              102   4e-20
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]   102   4e-20
ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like ...    94   1e-17
ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|2...    91   7e-17

>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/79 (65%), Positives = 61/79 (77%)
 Frame = -2

Query: 241 DTRVKDERLSVQPIRRSFSMDSATDRQLYLAVQEIVNQNKNGNGNGSDIVSSSEACSSKI 62
           DTR KD++ S+QPIRRSFSMDS+ DRQLYLA+QEI+ QN+  +       S SE CSS+ 
Sbjct: 281 DTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQNRPVSD-----FSPSEGCSSRF 335

Query: 61  RRSLFSFGHGRGSRRAVLP 5
           RRS FSFGHGRGSR AVLP
Sbjct: 336 RRSFFSFGHGRGSRSAVLP 354


>emb|CBI23610.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/79 (65%), Positives = 61/79 (77%)
 Frame = -2

Query: 241 DTRVKDERLSVQPIRRSFSMDSATDRQLYLAVQEIVNQNKNGNGNGSDIVSSSEACSSKI 62
           DTR KD++ S+QPIRRSFSMDS+ DRQLYLA+QEI+ QN+  +       S SE CSS+ 
Sbjct: 116 DTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQNRPVSD-----FSPSEGCSSRF 170

Query: 61  RRSLFSFGHGRGSRRAVLP 5
           RRS FSFGHGRGSR AVLP
Sbjct: 171 RRSFFSFGHGRGSRSAVLP 189


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score =  102 bits (253), Expect = 4e-20
 Identities = 52/79 (65%), Positives = 61/79 (77%)
 Frame = -2

Query: 241 DTRVKDERLSVQPIRRSFSMDSATDRQLYLAVQEIVNQNKNGNGNGSDIVSSSEACSSKI 62
           DTR KD++ S+QPIRRSFSMDS+ DRQLYLA+QEI+ QN+  +       S SE CSS+ 
Sbjct: 341 DTRGKDDQFSIQPIRRSFSMDSSNDRQLYLAIQEILQQNRPVSD-----FSPSEGCSSRF 395

Query: 61  RRSLFSFGHGRGSRRAVLP 5
           RRS FSFGHGRGSR AVLP
Sbjct: 396 RRSFFSFGHGRGSRSAVLP 414


>ref|XP_002263905.1| PREDICTED: RING-H2 finger protein ATL1-like [Vitis vinifera]
          Length = 351

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 49/79 (62%), Positives = 59/79 (74%)
 Frame = -2

Query: 241 DTRVKDERLSVQPIRRSFSMDSATDRQLYLAVQEIVNQNKNGNGNGSDIVSSSEACSSKI 62
           D R KD++  +QPIRRSFSMDSA D QLY+ VQEI+ +NKN        VS+S+ C S++
Sbjct: 272 DVREKDDQFLIQPIRRSFSMDSAADPQLYMTVQEII-RNKN---RPLSEVSTSQECDSRV 327

Query: 61  RRSLFSFGHGRGSRRAVLP 5
           RRS FSFGHGRGSR AVLP
Sbjct: 328 RRSFFSFGHGRGSRNAVLP 346


>ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|222863675|gb|EEF00806.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 48/80 (60%), Positives = 59/80 (73%), Gaps = 1/80 (1%)
 Frame = -2

Query: 241 DTRVKDERLS-VQPIRRSFSMDSATDRQLYLAVQEIVNQNKNGNGNGSDIVSSSEACSSK 65
           DTR KD++   +QPIRRSFSMDS+ DRQLYL++QEIV Q++         VSS E CS +
Sbjct: 261 DTRGKDDQFGLIQPIRRSFSMDSSADRQLYLSIQEIVQQSRQVTE-----VSSVEGCSGR 315

Query: 64  IRRSLFSFGHGRGSRRAVLP 5
            RR+ FSFGHGRGSR +VLP
Sbjct: 316 ARRAFFSFGHGRGSRSSVLP 335


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