BLASTX nr result

ID: Angelica23_contig00023244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023244
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   346   4e-93
emb|CBI36896.3| unnamed protein product [Vitis vinifera]              343   2e-92
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   328   8e-88
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   328   8e-88
ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinu...   320   2e-85

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  346 bits (887), Expect = 4e-93
 Identities = 180/254 (70%), Positives = 203/254 (79%), Gaps = 1/254 (0%)
 Frame = -3

Query: 780  SDQANLSSGENT-GKADVSPVSPMCVLPLYAMLPASAQLRVFNEVKDGERLVVVATNVAE 604
            SDQ+N + G+   G+ D+S    +CVLPLYAMLPA+AQLRVF E+K+GERLVVVATNVAE
Sbjct: 767  SDQSNPNMGKKRDGENDLS-AGALCVLPLYAMLPAAAQLRVFEEIKEGERLVVVATNVAE 825

Query: 603  TSLTIPGIKYVVDTGREKVKMYNSANGMESYEVQWISKXXXXXXXXXXXXXGPGHCYRLY 424
            TSLTIPGIKYVVDTGREKVK Y+ +NGME+YEVQWISK             GPGHCYRLY
Sbjct: 826  TSLTIPGIKYVVDTGREKVKNYDHSNGMETYEVQWISKASAAQRAGRAGRTGPGHCYRLY 885

Query: 423  SSAVFSNIFSDFSDAEISKIPVDGVVLLMKSMGIDKVANFPFPTAPELSAIRRAEECLKV 244
            SSAVF+NI  DFS AEI K+PV+GV+LLMKSM IDKVANFPFPT P+  A+  AE CLK 
Sbjct: 886  SSAVFNNILPDFSMAEILKVPVEGVILLMKSMDIDKVANFPFPTPPDAIALAEAERCLKA 945

Query: 243  LEALDTDGRLTSLGKAMAHYPMSPRHSRMLLTVIQILRKGKGYSRPNLVLGYXXXXXXAL 64
            LEAL++ GRLT LGKAMAHYPMSPRHSRMLLTVIQI+RK KGY+R NLVLGY      AL
Sbjct: 946  LEALNSKGRLTPLGKAMAHYPMSPRHSRMLLTVIQIMRKAKGYARANLVLGYAVAAAAAL 1005

Query: 63   SLSNPFITQFGGNH 22
            SL NPF+ QF GNH
Sbjct: 1006 SLPNPFVMQFEGNH 1019


>emb|CBI36896.3| unnamed protein product [Vitis vinifera]
          Length = 1098

 Score =  343 bits (881), Expect = 2e-92
 Identities = 179/253 (70%), Positives = 199/253 (78%)
 Frame = -3

Query: 780  SDQANLSSGENTGKADVSPVSPMCVLPLYAMLPASAQLRVFNEVKDGERLVVVATNVAET 601
            SD +  S  E   K D+S    +CVLPLYAMLPA+AQLRVF E+K+GERLVVVATNVAET
Sbjct: 527  SDSSYDSETEKDRKNDLS-AGALCVLPLYAMLPAAAQLRVFEEIKEGERLVVVATNVAET 585

Query: 600  SLTIPGIKYVVDTGREKVKMYNSANGMESYEVQWISKXXXXXXXXXXXXXGPGHCYRLYS 421
            SLTIPGIKYVVDTGREKVK Y+ +NGME+YEVQWISK             GPGHCYRLYS
Sbjct: 586  SLTIPGIKYVVDTGREKVKNYDHSNGMETYEVQWISKASAAQRAGRAGRTGPGHCYRLYS 645

Query: 420  SAVFSNIFSDFSDAEISKIPVDGVVLLMKSMGIDKVANFPFPTAPELSAIRRAEECLKVL 241
            SAVF+NI  DFS AEI K+PV+GV+LLMKSM IDKVANFPFPT P+  A+  AE CLK L
Sbjct: 646  SAVFNNILPDFSMAEILKVPVEGVILLMKSMDIDKVANFPFPTPPDAIALAEAERCLKAL 705

Query: 240  EALDTDGRLTSLGKAMAHYPMSPRHSRMLLTVIQILRKGKGYSRPNLVLGYXXXXXXALS 61
            EAL++ GRLT LGKAMAHYPMSPRHSRMLLTVIQI+RK KGY+R NLVLGY      ALS
Sbjct: 706  EALNSKGRLTPLGKAMAHYPMSPRHSRMLLTVIQIMRKAKGYARANLVLGYAVAAAAALS 765

Query: 60   LSNPFITQFGGNH 22
            L NPF+ QF GNH
Sbjct: 766  LPNPFVMQFEGNH 778


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  328 bits (841), Expect = 8e-88
 Identities = 171/233 (73%), Positives = 186/233 (79%)
 Frame = -3

Query: 723  VSPMCVLPLYAMLPASAQLRVFNEVKDGERLVVVATNVAETSLTIPGIKYVVDTGREKVK 544
            V  + VLPLYAMLPA+AQLRVF EVK+GERLVVVATNVAETSLTIPGIKYVVDTGREKVK
Sbjct: 707  VGALHVLPLYAMLPAAAQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVK 766

Query: 543  MYNSANGMESYEVQWISKXXXXXXXXXXXXXGPGHCYRLYSSAVFSNIFSDFSDAEISKI 364
             YNS+NG+E+YEVQWISK             GPGHCYRLYSSAVFSN   DFS AEI+KI
Sbjct: 767  TYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNTLPDFSLAEIAKI 826

Query: 363  PVDGVVLLMKSMGIDKVANFPFPTAPELSAIRRAEECLKVLEALDTDGRLTSLGKAMAHY 184
            PVDGVVLLMKSMGI KV NFPFPT PE SA+  AE CLK LEALD+ GRLT+LGKAMA Y
Sbjct: 827  PVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSGGRLTALGKAMAQY 886

Query: 183  PMSPRHSRMLLTVIQILRKGKGYSRPNLVLGYXXXXXXALSLSNPFITQFGGN 25
            P+SPRHSRMLLTVIQI+R  K Y R NLVL Y      ALS+SNPF+  F G+
Sbjct: 887  PLSPRHSRMLLTVIQIMRNLKNYDRANLVLAYSVAAAAALSMSNPFVMMFEGS 939


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  328 bits (841), Expect = 8e-88
 Identities = 171/233 (73%), Positives = 186/233 (79%)
 Frame = -3

Query: 723  VSPMCVLPLYAMLPASAQLRVFNEVKDGERLVVVATNVAETSLTIPGIKYVVDTGREKVK 544
            V  + VLPLYAMLPA+AQLRVF EVK+GERLVVVATNVAETSLTIPGIKYVVDTGREKVK
Sbjct: 707  VGALHVLPLYAMLPAAAQLRVFEEVKEGERLVVVATNVAETSLTIPGIKYVVDTGREKVK 766

Query: 543  MYNSANGMESYEVQWISKXXXXXXXXXXXXXGPGHCYRLYSSAVFSNIFSDFSDAEISKI 364
             YNS+NG+E+YEVQWISK             GPGHCYRLYSSAVFSN   DFS AEI+KI
Sbjct: 767  TYNSSNGIENYEVQWISKASAAQRAGRAGRTGPGHCYRLYSSAVFSNTLPDFSLAEIAKI 826

Query: 363  PVDGVVLLMKSMGIDKVANFPFPTAPELSAIRRAEECLKVLEALDTDGRLTSLGKAMAHY 184
            PVDGVVLLMKSMGI KV NFPFPT PE SA+  AE CLK LEALD+ GRLT+LGKAMA Y
Sbjct: 827  PVDGVVLLMKSMGISKVVNFPFPTPPETSAVLEAESCLKALEALDSGGRLTALGKAMAQY 886

Query: 183  PMSPRHSRMLLTVIQILRKGKGYSRPNLVLGYXXXXXXALSLSNPFITQFGGN 25
            P+SPRHSRMLLTVIQI+R  K Y R NLVL Y      ALS+SNPF+  F G+
Sbjct: 887  PLSPRHSRMLLTVIQIMRNLKNYDRANLVLAYSVAAAAALSMSNPFVMMFEGS 939


>ref|XP_002523130.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223537692|gb|EEF39315.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 868

 Score =  320 bits (820), Expect = 2e-85
 Identities = 163/256 (63%), Positives = 203/256 (79%)
 Frame = -3

Query: 777 DQANLSSGENTGKADVSPVSPMCVLPLYAMLPASAQLRVFNEVKDGERLVVVATNVAETS 598
           +Q+N S G+N+       +  + VLPLYAMLPA+AQLR+F+EVK+GERLVVVATNVAETS
Sbjct: 236 EQSNHSVGKNSRGGKGISIGALRVLPLYAMLPAAAQLRIFDEVKEGERLVVVATNVAETS 295

Query: 597 LTIPGIKYVVDTGREKVKMYNSANGMESYEVQWISKXXXXXXXXXXXXXGPGHCYRLYSS 418
           LTIP IKYVVDTGREKVK YN +NGME+YE+QWISK             GPGHCYRLYSS
Sbjct: 296 LTIPAIKYVVDTGREKVKNYNPSNGMETYEIQWISKASAAQRAGRAGRTGPGHCYRLYSS 355

Query: 417 AVFSNIFSDFSDAEISKIPVDGVVLLMKSMGIDKVANFPFPTAPELSAIRRAEECLKVLE 238
           AVF+NI  DFS AEISK+P++ +VL++KSM + KV NFPFPT PE +A++ AE+CLK+LE
Sbjct: 356 AVFNNILPDFSCAEISKVPLENIVLILKSMSV-KVENFPFPTPPEANALKEAEDCLKILE 414

Query: 237 ALDTDGRLTSLGKAMAHYPMSPRHSRMLLTVIQILRKGKGYSRPNLVLGYXXXXXXALSL 58
           ALD +GRLT+LGKAM+++PM PRHSRMLLTVIQIL K + ++RP+L+LGY      ALSL
Sbjct: 415 ALDENGRLTALGKAMSYFPMGPRHSRMLLTVIQIL-KFRNFARPHLILGYAAAAAAALSL 473

Query: 57  SNPFITQFGGNHDEKS 10
           SNPF+ QF G+ D+ +
Sbjct: 474 SNPFLIQFEGSQDDNN 489


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