BLASTX nr result

ID: Angelica23_contig00023230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023230
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17453.3| unnamed protein product [Vitis vinifera]              213   1e-53
ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi...   213   1e-53
ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-51
ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containi...   206   1e-51
ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|2...   205   3e-51

>emb|CBI17453.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score =  213 bits (542), Expect = 1e-53
 Identities = 100/159 (62%), Positives = 121/159 (76%)
 Frame = -3

Query: 479 NFTQIKLVHAHIIRKGLHQCCYVVTKLLRMLSNVGVPVNSYAHNVFDNVSQRNSFIWTAL 300
           +  Q+K VHAHI RKGL QCC+V+ KLLR L+ + VP++ Y   VF  V   N F+WTAL
Sbjct: 51  HINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTAL 110

Query: 299 IRGYCVKGSVNEAVRLYSLMRMEGIGPVSFTFSALLKACSVCEDVGLGRQIHGQIVSVGG 120
           IRGY ++G   E+V LY+ MR +GIGPVSFTF+ALLKACS   DV LGRQ+H Q + +GG
Sbjct: 111 IRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGG 170

Query: 119 FGGDLFVGNTMIDMYVKCGFLECGRRVFDEMVVRDVISW 3
           FG DL+VGNT+IDMYVKCG L CG RVFDEM+ RDVISW
Sbjct: 171 FGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISW 209


>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  213 bits (542), Expect = 1e-53
 Identities = 100/159 (62%), Positives = 121/159 (76%)
 Frame = -3

Query: 479 NFTQIKLVHAHIIRKGLHQCCYVVTKLLRMLSNVGVPVNSYAHNVFDNVSQRNSFIWTAL 300
           +  Q+K VHAHI RKGL QCC+V+ KLLR L+ + VP++ Y   VF  V   N F+WTAL
Sbjct: 51  HINQVKQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTAL 110

Query: 299 IRGYCVKGSVNEAVRLYSLMRMEGIGPVSFTFSALLKACSVCEDVGLGRQIHGQIVSVGG 120
           IRGY ++G   E+V LY+ MR +GIGPVSFTF+ALLKACS   DV LGRQ+H Q + +GG
Sbjct: 111 IRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGG 170

Query: 119 FGGDLFVGNTMIDMYVKCGFLECGRRVFDEMVVRDVISW 3
           FG DL+VGNT+IDMYVKCG L CG RVFDEM+ RDVISW
Sbjct: 171 FGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISW 209



 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 2/120 (1%)
 Frame = -3

Query: 356 AHNVFDNVSQRNSFIWTALIRGYCVKGSVNEAVRLYSLMRMEGIGPVSFTFSALLKACSV 177
           A  +FD +  ++   WTA++ GY       EA+ ++  M+  G+     T   ++ AC+ 
Sbjct: 225 ASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQ 284

Query: 176 CEDVGLGRQIHGQIVSVGGFG--GDLFVGNTMIDMYVKCGFLECGRRVFDEMVVRDVISW 3
                    +   +    GFG   ++ VG+ +IDMY KCG +E   +VF+ M  R+V S+
Sbjct: 285 LGAAKYANWVR-DVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERMEERNVYSY 343


>ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  206 bits (525), Expect = 1e-51
 Identities = 94/158 (59%), Positives = 121/158 (76%)
 Frame = -3

Query: 476 FTQIKLVHAHIIRKGLHQCCYVVTKLLRMLSNVGVPVNSYAHNVFDNVSQRNSFIWTALI 297
           F+QIK VHAHIIR GL QC YV+TKL+RML+ V VP+ SY   VF  V+  N F+WTA+I
Sbjct: 55  FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMI 114

Query: 296 RGYCVKGSVNEAVRLYSLMRMEGIGPVSFTFSALLKACSVCEDVGLGRQIHGQIVSVGGF 117
           RGY ++G ++E+   Y+ MR +G+GPVSFTFSAL KAC    ++ LG+Q+H Q + +GGF
Sbjct: 115 RGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGF 174

Query: 116 GGDLFVGNTMIDMYVKCGFLECGRRVFDEMVVRDVISW 3
             DL+VGN+MID+YVKCGFL C R+VFDEM  RDV+SW
Sbjct: 175 ASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSW 212



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
 Frame = -3

Query: 356 AHNVFDNVSQRNSFIWTALIRGYCVKGSVNEAVRLYSLMRMEGIGPVSFTFSALLKACSV 177
           A  +FD++  ++   WTA++ GY   G   EA+  +  M+  G+     T + ++ AC+ 
Sbjct: 228 ASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQ 287

Query: 176 CEDVGLGRQIHGQIVSVGGFG--GDLFVGNTMIDMYVKCGFLECGRRVFDEMVVRDVISW 3
              V     I   I    GFG  G++ VG+ +IDMY KCG  +   +VF+ M  R+V S+
Sbjct: 288 LGAVKHANWIR-DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSY 346



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/120 (30%), Positives = 59/120 (49%)
 Frame = -3

Query: 413 VVTKLLRMLSNVGVPVNSYAHNVFDNVSQRNSFIWTALIRGYCVKGSVNEAVRLYSLMRM 234
           V + L+ M S  G P  +Y   VF+ + +RN F ++++I GY + G  + A++L+  M  
Sbjct: 314 VGSALIDMYSKCGSPDEAY--KVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLK 371

Query: 233 EGIGPVSFTFSALLKACSVCEDVGLGRQIHGQIVSVGGFGGDLFVGNTMIDMYVKCGFLE 54
             I P   TF  +L ACS    V  GRQ+  ++    G          M+D+  + G LE
Sbjct: 372 TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLE 431


>ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  206 bits (525), Expect = 1e-51
 Identities = 94/158 (59%), Positives = 121/158 (76%)
 Frame = -3

Query: 476 FTQIKLVHAHIIRKGLHQCCYVVTKLLRMLSNVGVPVNSYAHNVFDNVSQRNSFIWTALI 297
           F+QIK VHAHIIR GL QC YV+TKL+RML+ V VP+ SY   VF  V+  N F+WTA+I
Sbjct: 55  FSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSYPLLVFGQVNYPNPFLWTAMI 114

Query: 296 RGYCVKGSVNEAVRLYSLMRMEGIGPVSFTFSALLKACSVCEDVGLGRQIHGQIVSVGGF 117
           RGY ++G ++E+   Y+ MR +G+GPVSFTFSAL KAC    ++ LG+Q+H Q + +GGF
Sbjct: 115 RGYALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGF 174

Query: 116 GGDLFVGNTMIDMYVKCGFLECGRRVFDEMVVRDVISW 3
             DL+VGN+MID+YVKCGFL C R+VFDEM  RDV+SW
Sbjct: 175 ASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSW 212



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 2/120 (1%)
 Frame = -3

Query: 356 AHNVFDNVSQRNSFIWTALIRGYCVKGSVNEAVRLYSLMRMEGIGPVSFTFSALLKACSV 177
           A  +FD++  ++   WTA++ GY   G   EA+  +  M+  G+     T + ++ AC+ 
Sbjct: 228 ASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQ 287

Query: 176 CEDVGLGRQIHGQIVSVGGFG--GDLFVGNTMIDMYVKCGFLECGRRVFDEMVVRDVISW 3
              V     I   I    GFG  G++ VG+ +IDMY KCG  +   +VF+ M  R+V S+
Sbjct: 288 LGAVKHANWIR-DIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKERNVFSY 346



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 37/120 (30%), Positives = 59/120 (49%)
 Frame = -3

Query: 413 VVTKLLRMLSNVGVPVNSYAHNVFDNVSQRNSFIWTALIRGYCVKGSVNEAVRLYSLMRM 234
           V + L+ M S  G P  +Y   VF+ + +RN F ++++I GY + G  + A++L+  M  
Sbjct: 314 VGSALIDMYSKCGSPDEAY--KVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDMLK 371

Query: 233 EGIGPVSFTFSALLKACSVCEDVGLGRQIHGQIVSVGGFGGDLFVGNTMIDMYVKCGFLE 54
             I P   TF  +L ACS    V  GRQ+  ++    G          M+D+  + G LE
Sbjct: 372 TEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPSPDHYACMVDLLGRAGCLE 431


>ref|XP_002327681.1| predicted protein [Populus trichocarpa] gi|222836766|gb|EEE75159.1|
           predicted protein [Populus trichocarpa]
          Length = 654

 Score =  205 bits (522), Expect = 3e-51
 Identities = 97/159 (61%), Positives = 120/159 (75%)
 Frame = -3

Query: 479 NFTQIKLVHAHIIRKGLHQCCYVVTKLLRMLSNVGVPVNSYAHNVFDNVSQRNSFIWTAL 300
           N TQIK VHA I+  GL Q CYV+ KL+R L+ + +PV+ Y  ++F+ V+  N F++ AL
Sbjct: 58  NLTQIKQVHARILLNGLDQSCYVLAKLIRTLTKLNIPVDPYPLSIFNQVNYPNPFLYNAL 117

Query: 299 IRGYCVKGSVNEAVRLYSLMRMEGIGPVSFTFSALLKACSVCEDVGLGRQIHGQIVSVGG 120
           IRGY ++  + E+   YSLMR EG+ PVSFTF+AL KAC    DVGLGRQIHGQ + VGG
Sbjct: 118 IRGYLIEERLKESTEFYSLMRKEGVVPVSFTFTALFKACGAKMDVGLGRQIHGQTILVGG 177

Query: 119 FGGDLFVGNTMIDMYVKCGFLECGRRVFDEMVVRDVISW 3
           FG DL VGN+MIDMY+KCGFLECGR+VFDEM  RDVISW
Sbjct: 178 FGEDLHVGNSMIDMYIKCGFLECGRKVFDEMPNRDVISW 216



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%)
 Frame = -3

Query: 356 AHNVFDNVSQRNSFIWTALIRGYCVKGSVNEAVRLYSLMRMEGIGPVSFTFSALLKACSV 177
           A  +FD +  ++   WT ++ G+       EA+  +  M+  G+     T   ++ AC+ 
Sbjct: 232 AGELFDGLPVKDMVAWTVMVSGFAQNAKPREAIMFFEKMQEFGVETDEITLIGVISACAQ 291

Query: 176 CEDVGLGRQIHGQIVSVGGFGG--DLFVGNTMIDMYVKCGFLECGRRVFDEMVVRDVISW 3
                    I   +     FGG   + VG+ +IDMY KCG +    RVF  M  R+V S+
Sbjct: 292 LGAAKYADWIR-DVAEKSEFGGKHSVVVGSALIDMYSKCGSVGDAYRVFQGMKERNVYSY 350


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