BLASTX nr result

ID: Angelica23_contig00023048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023048
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
emb|CBI28088.3| unnamed protein product [Vitis vinifera]              108   6e-22
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-...   108   6e-22
emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]   108   6e-22
ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-...    97   2e-18

>ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1|
           predicted protein [Populus trichocarpa]
          Length = 1107

 Score =  115 bits (288), Expect = 4e-24
 Identities = 55/87 (63%), Positives = 65/87 (74%)
 Frame = -3

Query: 262 GMKPLVPRLKRIQEDTSNSVVKTDCSLQNSSKRVKFLDQPLTDDNNHEELREVTSKFEWL 83
           GM+PLVPRLKRI ED      K  CS  NSSKRVK L  P +   NHEE+   TSKFEWL
Sbjct: 173 GMRPLVPRLKRILEDVPKFEDKNGCSFLNSSKRVKPLQDPASLIKNHEEISNSTSKFEWL 232

Query: 82  HPSKIKDANQRRPNNPLYDKRTLYIPP 2
            P++I+DAN+RRPN+PLYDK+TLY+PP
Sbjct: 233 DPAQIRDANRRRPNDPLYDKKTLYLPP 259


>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
          Length = 1126

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = -3

Query: 262 GMKPLVPRLKRIQEDTSNSVVKTDCSLQNSSKRVKFLDQPLTDDNNHEELREVTSKFEWL 83
           GM+P VPRLKRIQED   +  K +CSL +SSKR+K L    T + N+ E+ + TSKFEWL
Sbjct: 187 GMRPFVPRLKRIQEDNFEN--KNECSLLDSSKRLKLLQNSTTGNKNYGEVSDTTSKFEWL 244

Query: 82  HPSKIKDANQRRPNNPLYDKRTLYIPP 2
            PS+ +DAN+RRP + LYDKRTLYIPP
Sbjct: 245 DPSRKRDANRRRPGDALYDKRTLYIPP 271


>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
          Length = 1122

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = -3

Query: 262 GMKPLVPRLKRIQEDTSNSVVKTDCSLQNSSKRVKFLDQPLTDDNNHEELREVTSKFEWL 83
           GM+P VPRLKRIQED   +  K +CSL +SSKR+K L    T + N+ E+ + TSKFEWL
Sbjct: 185 GMRPFVPRLKRIQEDNFEN--KNECSLLDSSKRLKLLQNSTTGNKNYGEVSDTTSKFEWL 242

Query: 82  HPSKIKDANQRRPNNPLYDKRTLYIPP 2
            PS+ +DAN+RRP + LYDKRTLYIPP
Sbjct: 243 DPSRKRDANRRRPGDALYDKRTLYIPP 269


>emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
          Length = 1090

 Score =  108 bits (269), Expect = 6e-22
 Identities = 52/87 (59%), Positives = 65/87 (74%)
 Frame = -3

Query: 262 GMKPLVPRLKRIQEDTSNSVVKTDCSLQNSSKRVKFLDQPLTDDNNHEELREVTSKFEWL 83
           GM+P VPRLKRIQED   +  K +CSL +SSKR+K L    T + N+ E+ + TSKFEWL
Sbjct: 185 GMRPFVPRLKRIQEDNFEN--KNECSLLDSSKRLKLLQNSTTGNKNYGEVSDTTSKFEWL 242

Query: 82  HPSKIKDANQRRPNNPLYDKRTLYIPP 2
            PS+ +DAN+RRP + LYDKRTLYIPP
Sbjct: 243 DPSRKRDANRRRPGDALYDKRTLYIPP 269


>ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-like [Cucumis sativus]
          Length = 1095

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/90 (53%), Positives = 65/90 (72%), Gaps = 3/90 (3%)
 Frame = -3

Query: 262 GMKPLVPRLKRIQEDTSNSVVKTDCS---LQNSSKRVKFLDQPLTDDNNHEELREVTSKF 92
           GM+P V RLKR QE     V   +CS   LQ+S+KR+K L   +  +  H E+ + TSKF
Sbjct: 178 GMRPSVSRLKRSQE-----VSLVNCSGDSLQDSTKRIKLLQDSINLNKIHNEISDATSKF 232

Query: 91  EWLHPSKIKDANQRRPNNPLYDKRTLYIPP 2
           EWL+PS+++DAN+RRP++PLYDK+TLYIPP
Sbjct: 233 EWLNPSQVRDANRRRPDHPLYDKKTLYIPP 262


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