BLASTX nr result

ID: Angelica23_contig00023029 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023029
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608531.1| Pentatricopeptide repeat-containing protein ...    62   8e-08
emb|CBI33251.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]    60   2e-07
ref|XP_002271271.2| PREDICTED: uncharacterized protein LOC100243...    55   5e-06

>ref|XP_003608531.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355509586|gb|AES90728.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 877

 Score = 61.6 bits (148), Expect = 8e-08
 Identities = 42/141 (29%), Positives = 70/141 (49%), Gaps = 9/141 (6%)
 Frame = +3

Query: 81  NSIKTNLLKHNITPTPXXXXXXXXXXXXXXXXXXXX----NPILNQEPDQELAHKTLFEE 248
           + I+ +L++  +TPTP                        NP L++   Q L  +  F+E
Sbjct: 25  DKIRRSLIQKGVTPTPKIIHTLRKKQIQKHNRKLNRQNQLNPPLSKSQKQTLEEEQHFQE 84

Query: 249 IKNEYKNFKKSVKKDEG--RGVC--GKPWXXXXXXXXXXXSSFSKGERVGEKLKVEHLRE 416
           +K+EYK F +++++++G  +G+C  GKPW              +   R GEKLK E L E
Sbjct: 85  LKHEYKQFTQNLEENQGGNKGLCLIGKPWEGVEKVDFLERIKVNYEHR-GEKLKRESLIE 143

Query: 417 LGD-FIEGERDKFKWLLDDDV 476
           L + F E + D+ KW+ +DD+
Sbjct: 144 LKEMFRERKMDELKWVFEDDI 164


>emb|CBI33251.3| unnamed protein product [Vitis vinifera]
          Length = 462

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
 Frame = +3

Query: 87  IKTNLLKHNITPTPXXXXXXXXXXXXXXXXXXXXNPILNQEP--DQELAHKTLFEEIKNE 260
           IK NL++  + PTP                        NQ P  D+E+  +  F  +K E
Sbjct: 17  IKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQSPTEDEEVNEEAHFRTLKRE 76

Query: 261 YKNFKKSVKKDEGRGVCGKPWXXXXXXXXXXXSSFSKGERVGEKLKVEHLRELGDFIEGE 440
           Y    K++       + GKPW           S     E  GE+LK EHLREL + +E +
Sbjct: 77  YTKLSKAL-------MVGKPWERPGFKEILNGSV----EYGGERLKREHLRELSEILE-K 124

Query: 441 RDKFKWLLDDDVXXXXXXXXXXQRGESGRKVEG 539
           R + +WLLDDDV          +RG S  +  G
Sbjct: 125 RGEVRWLLDDDVEVEQGSSGNERRGWSPARRRG 157


>emb|CAN83935.1| hypothetical protein VITISV_035769 [Vitis vinifera]
          Length = 490

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 46/153 (30%), Positives = 64/153 (41%), Gaps = 2/153 (1%)
 Frame = +3

Query: 87  IKTNLLKHNITPTPXXXXXXXXXXXXXXXXXXXXNPILNQEP--DQELAHKTLFEEIKNE 260
           IK NL++  + PTP                        NQ P  D+E+  +  F  +K E
Sbjct: 17  IKRNLIRKGVYPTPKIIHTLRKKEIQKSIRKSKRLANQNQSPTEDEEVNEEAHFRTLKRE 76

Query: 261 YKNFKKSVKKDEGRGVCGKPWXXXXXXXXXXXSSFSKGERVGEKLKVEHLRELGDFIEGE 440
           Y    K++       + GKPW           S     E  GE+LK EHLREL + +E +
Sbjct: 77  YTKLSKAL-------MVGKPWERPGFKEILNGSV----EYGGERLKREHLRELSEILE-K 124

Query: 441 RDKFKWLLDDDVXXXXXXXXXXQRGESGRKVEG 539
           R + +WLLDDDV          +RG S  +  G
Sbjct: 125 RGEVRWLLDDDVEVEQGSSGNERRGWSPARRRG 157


>ref|XP_002271271.2| PREDICTED: uncharacterized protein LOC100243336 [Vitis vinifera]
          Length = 609

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 2/115 (1%)
 Frame = +3

Query: 201 NQEP--DQELAHKTLFEEIKNEYKNFKKSVKKDEGRGVCGKPWXXXXXXXXXXXSSFSKG 374
           NQ P  D+E+  +  F  +K EY    K++       + GKPW           S     
Sbjct: 193 NQSPTEDEEVNEEAHFRTLKREYTKLSKAL-------MVGKPWERPGFKEILNGSV---- 241

Query: 375 ERVGEKLKVEHLRELGDFIEGERDKFKWLLDDDVXXXXXXXXXXQRGESGRKVEG 539
           E  GE+LK EHLREL + +E +R + +WLLDDDV          +RG S  +  G
Sbjct: 242 EYGGERLKREHLRELSEILE-KRGEVRWLLDDDVEVEQGSSGNERRGWSPARRRG 295


Top