BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023014
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 69   1e-09
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    68   3e-09
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    67   5e-09
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta...    67   9e-09
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta...    52   2e-08

>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 38/94 (40%), Positives = 51/94 (54%), Gaps = 25/94 (26%)
 Frame = -1

Query: 211 MAKSKCPGPDGFTTEFFLATWNVTGED--VCIMHFFTSLHLP------------------ 92
           M  +K PGPDG+T+EFF ATW++TG+D    I  FF    LP                  
Sbjct: 38  MPSNKFPGPDGYTSEFFKATWSITGQDFIAAIKSFFIKGFLPKGLNATILALIPKKDEAT 97

Query: 91  -----RPISCCNTIHKRITKIVARRMKGVMASLI 5
                RPISCCN I+K I+KI+A R+K ++ + I
Sbjct: 98  LMRDYRPISCCNVIYKVISKIIANRLKVMLPTFI 131


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 68.2 bits (165), Expect = 3e-09
 Identities = 42/107 (39%), Positives = 55/107 (51%), Gaps = 25/107 (23%)
 Frame = -1

Query: 250  EELQGRKFCTFKHMAKSKCPGPDGFTTEFFLATWNVTGED--VCIMHFFTSLHLP----- 92
            EE+Q   F     M  +K PGPDG+T+EFF ATW++TG D    I  FF    LP     
Sbjct: 753  EEIQKVLFA----MPNNKSPGPDGYTSEFFKATWSLTGPDFIAAIQSFFVKGFLPKGLNA 808

Query: 91   ------------------RPISCCNTIHKRITKIVARRMKGVMASLI 5
                              RPISCCN ++K I+KI+A R+K ++ S I
Sbjct: 809  TILALIPKKDEAIEMKDYRPISCCNVLYKVISKILANRLKLLLPSFI 855


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
           [Arabidopsis thaliana]
          Length = 1223

 Score = 67.4 bits (163), Expect = 5e-09
 Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 25/94 (26%)
 Frame = -1

Query: 211 MAKSKCPGPDGFTTEFFLATWNVTGED--VCIMHFFTSLHLP------------------ 92
           M   K PGPDG+T+EFF ATW + G++  + +  FFT   LP                  
Sbjct: 465 MPSDKSPGPDGYTSEFFKATWEIIGDEFTLAVQSFFTKGFLPKGINSTILALIPKKTEAR 524

Query: 91  -----RPISCCNTIHKRITKIVARRMKGVMASLI 5
                RPISCCN ++K I+KI+A R+K V+   I
Sbjct: 525 EMKDYRPISCCNVLYKVISKIIANRLKLVLPKFI 558


>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1216

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 25/94 (26%)
 Frame = -1

Query: 211 MAKSKCPGPDGFTTEFFLATWNVTGEDV--CIMHFFTSLHLP------------------ 92
           M K K PGPDG+T+EF+ A+W + G++V   I  FF    LP                  
Sbjct: 186 MPKDKSPGPDGYTSEFYKASWEIIGDEVIIAIQSFFAKGFLPKGVNSTILALIPKKKEAR 245

Query: 91  -----RPISCCNTIHKRITKIVARRMKGVMASLI 5
                RPISCCN ++K I+KI+A R+K ++   I
Sbjct: 246 EIKDYRPISCCNVLYKAISKILANRLKRILPKFI 279


>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1229

 Score = 52.0 bits (123), Expect(3) = 2e-08
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 25/91 (27%)
 Frame = -1

Query: 202 SKCPGPDGFTTEFFLATWNVTGEDVC--IMHFFTSLHLP--------------------- 92
           SK PGPDGFT  F+ + W++   DV   I  FFTS + P                     
Sbjct: 338 SKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPKDLGPRKVA 397

Query: 91  --RPISCCNTIHKRITKIVARRMKGVMASLI 5
             RPI+ CN  +K + KI+ +RM+ ++  LI
Sbjct: 398 DYRPIALCNIFYKIVAKIMTKRMQLILPKLI 428



 Score = 27.3 bits (59), Expect(3) = 2e-08
 Identities = 15/82 (18%), Positives = 33/82 (40%)
 Frame = -3

Query: 476 QNNYFFFNYCKGRWNPSKILALEDKNAQGGSRNHNIASIAVEYYKDLLGTEVEVDDFPPN 297
           +N  +F    + R   +++  +ED N       H I+ I   Y++ +  +E + D    +
Sbjct: 245 RNTGYFHAVTRNRRTQNRLTVMEDINGVAQHEEHQISQIISGYFQQIFTSESDGDFSVVD 304

Query: 296 LCLPQLREDQANSLCGRVTGEE 231
             +  +     N    R+  +E
Sbjct: 305 EAIEPMVSQGDNDFLTRIPNDE 326



 Score = 25.4 bits (54), Expect(3) = 2e-08
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 570 GRLSRLYSEALVEKEKFLRQKSRFNWVNCGD 478
           G L+     A   +E+F +Q+SR  W++ GD
Sbjct: 214 GALTATLEHAYKLEEQFWKQRSRVLWLHSGD 244