BLASTX nr result

ID: Angelica23_contig00023011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00023011
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533153.1| conserved hypothetical protein [Ricinus comm...   118   4e-25
ref|XP_002315219.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002278568.2| PREDICTED: AP3-complex subunit beta-A-like [...   108   5e-22
ref|XP_003544215.1| PREDICTED: AP3-complex subunit beta-A-like [...   100   2e-19
ref|XP_002878034.1| hypothetical protein ARALYDRAFT_348635 [Arab...   100   2e-19

>ref|XP_002533153.1| conserved hypothetical protein [Ricinus communis]
           gi|223527048|gb|EEF29234.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1121

 Score =  118 bits (296), Expect = 4e-25
 Identities = 67/127 (52%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +1

Query: 16  EYINSEMDNLDTDFVVKEDTNVVGSGEYQSKLLEMASKSYLEGSEKYPSHINYEDKGTFQ 195
           E   SE D  D +F ++++ + V S +Y S+L  M S+SY+EG ++Y +  +Y D  + +
Sbjct: 262 ESSQSEKDGSDVEFSLEKENSSV-SWKYDSELASMVSRSYIEGPDEYLARTSYADSVSSE 320

Query: 196 SGFPKFTSAK-NDDVRILLQCTLPLLWSLWSQNSAVVLAAAGLHWIMAPKVGLRRIVKLL 372
               KFTS K NDDV+ILLQCT PLLWS    NSAVVLAAAG+HWIMAP   ++RIVK L
Sbjct: 321 FNGAKFTSVKSNDDVKILLQCTSPLLWS---NNSAVVLAAAGVHWIMAPFEDVKRIVKPL 377

Query: 373 LFILRSS 393
           LF+LRSS
Sbjct: 378 LFLLRSS 384


>ref|XP_002315219.1| predicted protein [Populus trichocarpa] gi|222864259|gb|EEF01390.1|
           predicted protein [Populus trichocarpa]
          Length = 991

 Score =  113 bits (282), Expect = 2e-23
 Identities = 65/127 (51%), Positives = 86/127 (67%), Gaps = 1/127 (0%)
 Frame = +1

Query: 16  EYINSEMDNLDTDFVVKEDTNVVGSGEYQSKLLEMASKSYLEGSEKYPSHINYEDKGTFQ 195
           E  +SE D+ D DF  K D +   SG+Y S L    S+ Y+EG ++Y S  +Y ++ +F+
Sbjct: 134 ERSHSEKDDSDDDFAFKNDVSGT-SGKYDSDLARTISRCYIEGPDEYLSRSSYANRISFE 192

Query: 196 SGFPKFTSAK-NDDVRILLQCTLPLLWSLWSQNSAVVLAAAGLHWIMAPKVGLRRIVKLL 372
               KFTS + ND+V+ILLQ T PLLWS    NSAVV+AAAG+HWIMAP   ++RIVK L
Sbjct: 193 FNEAKFTSGRSNDEVKILLQGTSPLLWS---NNSAVVVAAAGVHWIMAPTEEVKRIVKPL 249

Query: 373 LFILRSS 393
           LF+LRSS
Sbjct: 250 LFLLRSS 256


>ref|XP_002278568.2| PREDICTED: AP3-complex subunit beta-A-like [Vitis vinifera]
           gi|296086225|emb|CBI31666.3| unnamed protein product
           [Vitis vinifera]
          Length = 1140

 Score =  108 bits (270), Expect = 5e-22
 Identities = 62/128 (48%), Positives = 85/128 (66%), Gaps = 1/128 (0%)
 Frame = +1

Query: 13  SEYINSEMDNLDTDFVVKEDTNVVGSGEYQSKLLEMASKSYLEGSEKYPSHINYEDKGTF 192
           +E   SE D  D +   +ED    G G + S+L+ M S+ Y+EG ++Y S ++Y ++ + 
Sbjct: 261 TESSQSEKDGSDINSAFEEDNGDTGRG-FMSELVNMVSRCYIEGPDEYLSRLSYINEVSS 319

Query: 193 QSGFPKFTSAK-NDDVRILLQCTLPLLWSLWSQNSAVVLAAAGLHWIMAPKVGLRRIVKL 369
                 F S + NDDV++LLQCT PLLWS    NSAVVLAAAG+HWIMAP+  ++RIVK 
Sbjct: 320 GLDRSCFMSGRGNDDVKMLLQCTSPLLWS---HNSAVVLAAAGVHWIMAPREDVKRIVKP 376

Query: 370 LLFILRSS 393
           LLF+LRSS
Sbjct: 377 LLFLLRSS 384


>ref|XP_003544215.1| PREDICTED: AP3-complex subunit beta-A-like [Glycine max]
          Length = 1129

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 59/132 (44%), Positives = 83/132 (62%), Gaps = 2/132 (1%)
 Frame = +1

Query: 10  FSEYINSEMDNLDTD--FVVKEDTNVVGSGEYQSKLLEMASKSYLEGSEKYPSHINYEDK 183
           FS Y N ++DNL+ D  ++  ++       +  S+L  M  + Y+EG ++Y S  +  ++
Sbjct: 256 FSLY-NKDIDNLEEDESYITSKEDAGYSIDKTVSELATMVFQCYIEGPDEYLSRSSSTNR 314

Query: 184 GTFQSGFPKFTSAKNDDVRILLQCTLPLLWSLWSQNSAVVLAAAGLHWIMAPKVGLRRIV 363
              +    ++TS  ND V+ILL CT PLLWS    NSAVVLAAAG+HWIMA K  ++RIV
Sbjct: 315 VAPKLDVSQYTSCSNDVVKILLHCTSPLLWS---NNSAVVLAAAGVHWIMASKEHIKRIV 371

Query: 364 KLLLFILRSSGA 399
           K LLF+LRSS A
Sbjct: 372 KPLLFVLRSSSA 383


>ref|XP_002878034.1| hypothetical protein ARALYDRAFT_348635 [Arabidopsis lyrata subsp.
           lyrata] gi|297323872|gb|EFH54293.1| hypothetical protein
           ARALYDRAFT_348635 [Arabidopsis lyrata subsp. lyrata]
          Length = 1116

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 58/124 (46%), Positives = 78/124 (62%), Gaps = 1/124 (0%)
 Frame = +1

Query: 31  EMDNLDTDFVVKEDTNVVGSGEYQSKLLEMASKSYLEGSEKYPSHINYEDKGTFQSGFPK 210
           E D L  D  + ++ +   S  +   L+ + SK Y+EG ++Y S  +Y D  +      +
Sbjct: 268 EKDGLGRDLTLDKEEDGGKSDSFDVNLVSLVSKCYIEGPDEYLSRSSYTDTVSSAFDSKE 327

Query: 211 FTS-AKNDDVRILLQCTLPLLWSLWSQNSAVVLAAAGLHWIMAPKVGLRRIVKLLLFILR 387
            TS A N+DV+ILLQCT PLLWS    NSAVVLAAAG+ WIMAP   +++IVK LLF+LR
Sbjct: 328 TTSIAHNEDVKILLQCTSPLLWS---NNSAVVLAAAGVQWIMAPLEEVKKIVKPLLFLLR 384

Query: 388 SSGA 399
           SS A
Sbjct: 385 SSSA 388


Top