BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022970
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab...    85   6e-15
ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana] gi...    85   8e-15
ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana] gi...    85   8e-15
ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-...    81   1e-13
ref|XP_002514062.1| replication factor A 1, rfa1, putative [Rici...    81   1e-13

>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
           lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
           ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
 Frame = -1

Query: 316 KSASFSGKSIENISSSQLFIK*DSQEMINLRLWFD------STILLDRPSLETVCLVYKR 155
           K + FSGKS+  ISS+QLFI  D  E   LR WFD      ++  + R ++       + 
Sbjct: 404 KVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDHGGKDTASFSISRDTMPGGVSRNEI 463

Query: 154 MRPLSWIMYEDLDRSDKPDWITVKAHITFIK---LAYTAYMLMIRSIQCNKKVT 2
            + +S I  E L RSDKPDWITVKA I+FIK     YTA  LMI   QCNKKVT
Sbjct: 464 RKSVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVT 517


>ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana]
           gi|330250915|gb|AEC06009.1| replication factor A1
           [Arabidopsis thaliana]
          Length = 617

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
 Frame = -1

Query: 316 KSASFSGKSIENISSSQLFIK*DSQEMINLRLWFD------STILLDRPSLETVCLVYKR 155
           K + FSGKS+  ISS+QLFI  D  E   LR WFD      ++  + R ++       + 
Sbjct: 381 KVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEI 440

Query: 154 MRPLSWIMYEDLDRSDKPDWITVKAHITFIK---LAYTAYMLMIRSIQCNKKVT 2
            + +S I  E L RSDKPDWITVKA I+FIK     YTA  LMI   QCNKKVT
Sbjct: 441 RKNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVT 494


>ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
           gi|4584356|gb|AAD25150.1| putative replication protein
           A1 [Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
           putative replication protein A1 [Arabidopsis thaliana]
           gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
           thaliana] gi|330250916|gb|AEC06010.1| replication factor
           A1 [Arabidopsis thaliana]
          Length = 640

 Score = 84.7 bits (208), Expect = 8e-15
 Identities = 54/114 (47%), Positives = 66/114 (57%), Gaps = 9/114 (7%)
 Frame = -1

Query: 316 KSASFSGKSIENISSSQLFIK*DSQEMINLRLWFD------STILLDRPSLETVCLVYKR 155
           K + FSGKS+  ISS+QLFI  D  E   LR WFD      ++  + R ++       + 
Sbjct: 404 KVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEI 463

Query: 154 MRPLSWIMYEDLDRSDKPDWITVKAHITFIK---LAYTAYMLMIRSIQCNKKVT 2
            + +S I  E L RSDKPDWITVKA I+FIK     YTA  LMI   QCNKKVT
Sbjct: 464 RKNVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKVT 517


>ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 637

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 55/113 (48%), Positives = 64/113 (56%), Gaps = 8/113 (7%)
 Frame = -1

Query: 316 KSASFSGKSIENISSSQLFIK*DSQEMINLRLWF-----DSTILLDRPSLETVCLVYKRM 152
           K   FSGKSI +IS++QLFI  D  E  +LR WF     DS  L     +    L  +  
Sbjct: 398 KVNDFSGKSIGSISTTQLFINPDFPEAHSLREWFELVGKDSASLSISKDIIPGALKNEVR 457

Query: 151 RPLSWIMYEDLDRSDKPDWITVKAHITFIK---LAYTAYMLMIRSIQCNKKVT 2
           + +S I  E L RSDKPDWITV+A I FIK     YTA  LMI   QCNKKVT
Sbjct: 458 KTVSQIKDEGLGRSDKPDWITVRAAILFIKTDTFCYTACPLMIGDRQCNKKVT 510


>ref|XP_002514062.1| replication factor A 1, rfa1, putative [Ricinus communis]
           gi|223546518|gb|EEF48016.1| replication factor A 1,
           rfa1, putative [Ricinus communis]
          Length = 670

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 55/126 (43%), Positives = 71/126 (56%), Gaps = 9/126 (7%)
 Frame = -1

Query: 352 SKDFGSDFLYSFKSASFSGKSIENISSSQLFIK*DSQEMINLRLWFD------STILLDR 191
           S DF    + + K + FSGKS+  ISS+QLFI  D  E   L+ WFD      +++ + R
Sbjct: 419 SGDFPVLAVKAGKVSDFSGKSLGTISSTQLFINPDIPEAHGLKDWFDRGGQHTASVSISR 478

Query: 190 PSLETVCLVYKRMRPLSWIMYEDLDRSDKPDWITVKAHITFIK---LAYTAYMLMIRSIQ 20
             L        R + +S I +E L RSD+PDW+TV A ITF+K     YTA  LMI   Q
Sbjct: 479 DILPGGSKNEIR-KTVSQIKHEGLGRSDRPDWVTVSARITFVKTDTFCYTACPLMIGDRQ 537

Query: 19  CNKKVT 2
           CNKKVT
Sbjct: 538 CNKKVT 543