BLASTX nr result

ID: Angelica23_contig00022946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022946
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containi...   185   4e-45
ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   182   2e-44
emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]   182   2e-44
emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]   181   7e-44
ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41

>ref|XP_003550925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g17616-like [Glycine max]
          Length = 684

 Score =  185 bits (469), Expect = 4e-45
 Identities = 86/125 (68%), Positives = 104/125 (83%)
 Frame = +3

Query: 3   MRIHPTQLTFFTLISGYSSLNMYREITIIWGEIKRNMESCSLAPDRDLYELLLYNFIRGG 182
           M+I PT  TF  L+ GYSSL MYREITI+WG+IKR M S +L  +RDLYELLL NF+RGG
Sbjct: 559 MKIQPTSQTFAFLMCGYSSLGMYREITILWGDIKRFMRSGNLVGNRDLYELLLLNFLRGG 618

Query: 183 YFERVMEIISHMKDHSMFIDKWMYKREFLKYHKDLYRNLKASNAKNEIQSDRIEYVQAFR 362
           YFERV+E+ISHM+DH+M+ DKWMYK EFL+ HK+LYR+LKASN + E QS R+E+VQ FR
Sbjct: 619 YFERVLEVISHMRDHNMYPDKWMYKNEFLRLHKNLYRSLKASNTRTEAQSKRLEHVQEFR 678

Query: 363 KWVGI 377
           KWVGI
Sbjct: 679 KWVGI 683


>ref|XP_003635270.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g17616-like, partial [Vitis vinifera]
          Length = 457

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/123 (69%), Positives = 98/123 (79%)
 Frame = +3

Query: 9   IHPTQLTFFTLISGYSSLNMYREITIIWGEIKRNMESCSLAPDRDLYELLLYNFIRGGYF 188
           I PT  T   L+ GYS LNMYREITI+WG IKR+ ES SL   RDLYE L+ NF+RGGYF
Sbjct: 334 IEPTVQTSINLVYGYSCLNMYREITILWGNIKRSRESGSLVVCRDLYEFLVLNFLRGGYF 393

Query: 189 ERVMEIISHMKDHSMFIDKWMYKREFLKYHKDLYRNLKASNAKNEIQSDRIEYVQAFRKW 368
           ERVME+I HMK+ +M+ DKWMYK EFLK+HKDLYRNLKASN + E QS R+EYV+AFRKW
Sbjct: 394 ERVMEVIGHMKEQNMYCDKWMYKSEFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKW 453

Query: 369 VGI 377
            GI
Sbjct: 454 AGI 456


>emb|CAN61142.1| hypothetical protein VITISV_004317 [Vitis vinifera]
          Length = 854

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/123 (69%), Positives = 98/123 (79%)
 Frame = +3

Query: 9    IHPTQLTFFTLISGYSSLNMYREITIIWGEIKRNMESCSLAPDRDLYELLLYNFIRGGYF 188
            I PT  T   L+ GYS LNMYREITI+WG IKR+ ES SL   RDLYE L+ NF+RGGYF
Sbjct: 731  IEPTVQTSINLVYGYSCLNMYREITILWGNIKRSRESGSLVVCRDLYEFLVLNFLRGGYF 790

Query: 189  ERVMEIISHMKDHSMFIDKWMYKREFLKYHKDLYRNLKASNAKNEIQSDRIEYVQAFRKW 368
            ERVME+I HMK+ +M+ DKWMYK EFLK+HKDLYRNLKASN + E QS R+EYV+AFRKW
Sbjct: 791  ERVMEVIGHMKEQNMYCDKWMYKSEFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFRKW 850

Query: 369  VGI 377
             GI
Sbjct: 851  AGI 853


>emb|CAN69520.1| hypothetical protein VITISV_018331 [Vitis vinifera]
          Length = 444

 Score =  181 bits (458), Expect = 7e-44
 Identities = 84/125 (67%), Positives = 100/125 (80%)
 Frame = +3

Query: 3   MRIHPTQLTFFTLISGYSSLNMYREITIIWGEIKRNMESCSLAPDRDLYELLLYNFIRGG 182
           M+I PT  TF  L+ GYS LNMYREITI+WG+IK + +S SL   RDLYE L+ NF+RGG
Sbjct: 319 MKIEPTVQTFINLVYGYSCLNMYREITILWGDIKSSRKSGSLVVCRDLYEFLVLNFLRGG 378

Query: 183 YFERVMEIISHMKDHSMFIDKWMYKREFLKYHKDLYRNLKASNAKNEIQSDRIEYVQAFR 362
           YFERVME+I  MK+ +M+ DKWMYKREFLK+HKDLYRNLKASN + E QS R+EYV+AFR
Sbjct: 379 YFERVMEVIGCMKEQNMYCDKWMYKREFLKFHKDLYRNLKASNTRTEAQSKRLEYVEAFR 438

Query: 363 KWVGI 377
            W GI
Sbjct: 439 TWAGI 443


>ref|XP_002329596.1| predicted protein [Populus trichocarpa] gi|222870305|gb|EEF07436.1|
           predicted protein [Populus trichocarpa]
          Length = 701

 Score =  172 bits (436), Expect = 3e-41
 Identities = 81/125 (64%), Positives = 100/125 (80%)
 Frame = +3

Query: 3   MRIHPTQLTFFTLISGYSSLNMYREITIIWGEIKRNMESCSLAPDRDLYELLLYNFIRGG 182
           M+I PT  TF  LI G+SSL MYR+ITI+WG+IKRN+ S  L   RDLYE+L  NF+RGG
Sbjct: 576 MKIQPTVQTFSYLIDGFSSLGMYRDITILWGDIKRNVGSKDLEVSRDLYEVLHLNFLRGG 635

Query: 183 YFERVMEIISHMKDHSMFIDKWMYKREFLKYHKDLYRNLKASNAKNEIQSDRIEYVQAFR 362
           YFER ME+I +MK+ +M+ DKWMYK EFLK HK+LYR+LKAS A+ E QS R+E+V+AFR
Sbjct: 636 YFERAMEVIGYMKERNMYCDKWMYKDEFLKLHKNLYRSLKASEARTEAQSKRLEHVKAFR 695

Query: 363 KWVGI 377
           KWVGI
Sbjct: 696 KWVGI 700


Top