BLASTX nr result

ID: Angelica23_contig00022915 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022915
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18867.3| unnamed protein product [Vitis vinifera]              106   2e-21
gb|ADI58371.1| pentatricopeptide repeat-containing protein [Caps...   100   9e-20
gb|AAF17637.1|AC009978_13 T23E18.21 [Arabidopsis thaliana]             85   5e-15
ref|NP_001185409.1| pentatricopeptide repeat-containing protein ...    85   5e-15
ref|NP_001031285.4| pentatricopeptide repeat-containing protein ...    85   5e-15

>emb|CBI18867.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  106 bits (265), Expect = 2e-21
 Identities = 62/166 (37%), Positives = 90/166 (54%)
 Frame = +3

Query: 3   AAYAVLQHMXXXXXXXXSIVNTNAKGSPYTERLDIPIPSYTALNLENVNIDNQTFVPSVV 182
           +AYA LQHM          +N +A+G   + RLDIPIP    + L+    +N+  +PSV 
Sbjct: 250 SAYAALQHMVDLVFKGSIFINKSAEGRLCSSRLDIPIPKNGDMGLKRCMEENEHSLPSVS 309

Query: 183 EHCNNMGTQASDNLQLSTFDFKKHEVGNVGTDVLSRCVSVQVLQVLRASFNSVIYACAEA 362
           ++   + + AS                            + V++VLR SF+ VIYACA+ 
Sbjct: 310 DNSKKIDSHAS----------------------------MPVMKVLRWSFSDVIYACAQT 341

Query: 363 KNSSLAEHIILQMQNLGVEPSSSTYVGFMRAVVKDKGSQAGIELLK 500
           +N  LAE +ILQMQNLG+EPS  TY G ++A+V D+G   G+E+LK
Sbjct: 342 QNCGLAEQLILQMQNLGLEPSCHTYDGLIKAIVSDRGFSDGMEVLK 387


>gb|ADI58371.1| pentatricopeptide repeat-containing protein [Capsicum annuum]
          Length = 805

 Score =  100 bits (250), Expect = 9e-20
 Identities = 61/166 (36%), Positives = 91/166 (54%)
 Frame = +3

Query: 3   AAYAVLQHMXXXXXXXXSIVNTNAKGSPYTERLDIPIPSYTALNLENVNIDNQTFVPSVV 182
           +AY  LQHM         I  T A+G     RLDIP PS  + +  +V++D        +
Sbjct: 245 SAYTALQHMVRLAFRDCDISRT-AEGRFCDVRLDIPAPSTGSWSFIDVSLD--------I 295

Query: 183 EHCNNMGTQASDNLQLSTFDFKKHEVGNVGTDVLSRCVSVQVLQVLRASFNSVIYACAEA 362
           E  +N             FD +   +GN+    + + +S  V+++LR SFN V++ACA+ 
Sbjct: 296 EGSSN-------------FDIESQSLGNMEISTVRKKLSASVMKLLRWSFNDVMHACAKV 342

Query: 363 KNSSLAEHIILQMQNLGVEPSSSTYVGFMRAVVKDKGSQAGIELLK 500
           +N  LAE +ILQMQ LG++PS STY GF+RA+   +G   G+E+LK
Sbjct: 343 QNCDLAEQLILQMQTLGLQPSGSTYDGFIRAIATTRGFSEGVEVLK 388


>gb|AAF17637.1|AC009978_13 T23E18.21 [Arabidopsis thaliana]
          Length = 800

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 60/166 (36%), Positives = 82/166 (49%)
 Frame = +3

Query: 3   AAYAVLQHMXXXXXXXXSIVNTNAKGSPYTERLDIPIPSYTALNLENVNIDNQTFVPSVV 182
           +AY +LQHM          V +N +G  ++ RL IP+PS      E         V   +
Sbjct: 206 SAYELLQHMVYLALRGEFFVKSN-RGKLHSTRLYIPVPSKDETGSEKFAFG----VTDRI 260

Query: 183 EHCNNMGTQASDNLQLSTFDFKKHEVGNVGTDVLSRCVSVQVLQVLRASFNSVIYACAEA 362
             CN+    A           K H               +  ++VLR SFN VI+AC ++
Sbjct: 261 VDCNSSSKVALP---------KGHN-------------KILAIRVLRWSFNDVIHACGQS 298

Query: 363 KNSSLAEHIILQMQNLGVEPSSSTYVGFMRAVVKDKGSQAGIELLK 500
           KNS LAE ++LQMQNLG+ PSS TY GF+RAV   +G + G+ LLK
Sbjct: 299 KNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLK 344


>ref|NP_001185409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332197699|gb|AEE35820.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 801

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 60/166 (36%), Positives = 82/166 (49%)
 Frame = +3

Query: 3   AAYAVLQHMXXXXXXXXSIVNTNAKGSPYTERLDIPIPSYTALNLENVNIDNQTFVPSVV 182
           +AY +LQHM          V +N +G  ++ RL IP+PS      E         V   +
Sbjct: 250 SAYELLQHMVYLALRGEFFVKSN-RGKLHSTRLYIPVPSKDETGSEKFAFG----VTDRI 304

Query: 183 EHCNNMGTQASDNLQLSTFDFKKHEVGNVGTDVLSRCVSVQVLQVLRASFNSVIYACAEA 362
             CN+    A           K H               +  ++VLR SFN VI+AC ++
Sbjct: 305 VDCNSSSKVALP---------KGHN-------------KILAIRVLRWSFNDVIHACGQS 342

Query: 363 KNSSLAEHIILQMQNLGVEPSSSTYVGFMRAVVKDKGSQAGIELLK 500
           KNS LAE ++LQMQNLG+ PSS TY GF+RAV   +G + G+ LLK
Sbjct: 343 KNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLK 388


>ref|NP_001031285.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|332197698|gb|AEE35819.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 693

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 60/166 (36%), Positives = 82/166 (49%)
 Frame = +3

Query: 3   AAYAVLQHMXXXXXXXXSIVNTNAKGSPYTERLDIPIPSYTALNLENVNIDNQTFVPSVV 182
           +AY +LQHM          V +N +G  ++ RL IP+PS      E         V   +
Sbjct: 254 SAYELLQHMVYLALRGEFFVKSN-RGKLHSTRLYIPVPSKDETGSEKFAFG----VTDRI 308

Query: 183 EHCNNMGTQASDNLQLSTFDFKKHEVGNVGTDVLSRCVSVQVLQVLRASFNSVIYACAEA 362
             CN+    A           K H               +  ++VLR SFN VI+AC ++
Sbjct: 309 VDCNSSSKVALP---------KGHN-------------KILAIRVLRWSFNDVIHACGQS 346

Query: 363 KNSSLAEHIILQMQNLGVEPSSSTYVGFMRAVVKDKGSQAGIELLK 500
           KNS LAE ++LQMQNLG+ PSS TY GF+RAV   +G + G+ LLK
Sbjct: 347 KNSELAEQLMLQMQNLGLLPSSHTYDGFIRAVAFPEGYEYGMTLLK 392


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