BLASTX nr result

ID: Angelica23_contig00022870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022870
         (668 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containi...   345   5e-93
emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]   345   5e-93
ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containi...   318   6e-85
ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containi...   318   8e-85
ref|XP_002531020.1| pentatricopeptide repeat-containing protein,...   314   9e-84

>ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
           [Vitis vinifera] gi|296081020|emb|CBI18524.3| unnamed
           protein product [Vitis vinifera]
          Length = 513

 Score =  345 bits (885), Expect = 5e-93
 Identities = 164/222 (73%), Positives = 192/222 (86%)
 Frame = +2

Query: 2   INDSLYPDKPLHPVLSQQIPPTALSTSIVENVLGCLFATHANGLKASEFFRYTLEAPHLC 181
           IND  +PD PLH  L Q +P   LS + VENVLG LFA H+NG KA EFF+++L+    C
Sbjct: 50  INDHPFPDHPLHSTLIQHVPKHLLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFC 109

Query: 182 PSADAFEKTLHILTRMRYFDKAWELMEEIKKKHPSLLTIKSMSIVLSRIARFQSFEETLE 361
           PS+DAFEKTLHILTRMRYFDKAWELMEEI++ HPSLLT+KSMSI+LSRIA+FQS+E+TLE
Sbjct: 110 PSSDAFEKTLHILTRMRYFDKAWELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLE 169

Query: 362 AFQRMEDTIYIRNKFGTDEFNVLLRAFCTQRQMKEARSVFNKLHSRFSPNTKTMNILLLG 541
           AF RME  ++   +FG +EFNVLLRAFCTQRQMKEARSVF+K+HSRFSPNTKTMNILLLG
Sbjct: 170 AFGRMEKNVFFGREFGANEFNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLG 229

Query: 542 FKESGDITSVELFYHDMTRRGFKPDNITYNIRIDAYCKKGSF 667
           FKESGD+T+VELFYH+M RRGFKP+++TYNIRIDAYCKKG F
Sbjct: 230 FKESGDVTAVELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCF 271


>emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
          Length = 515

 Score =  345 bits (885), Expect = 5e-93
 Identities = 164/222 (73%), Positives = 192/222 (86%)
 Frame = +2

Query: 2   INDSLYPDKPLHPVLSQQIPPTALSTSIVENVLGCLFATHANGLKASEFFRYTLEAPHLC 181
           IND  +PD PLH  L Q +P   LS + VENVLG LFA H+NG KA EFF+++L+    C
Sbjct: 50  INDHPFPDHPLHSTLIQHVPKHLLSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFC 109

Query: 182 PSADAFEKTLHILTRMRYFDKAWELMEEIKKKHPSLLTIKSMSIVLSRIARFQSFEETLE 361
           PS+DAFEKTLHILTRMRYFDKAWELMEEI++ HPSLLT+KSMSI+LSRIA+FQS+E+TLE
Sbjct: 110 PSSDAFEKTLHILTRMRYFDKAWELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLE 169

Query: 362 AFQRMEDTIYIRNKFGTDEFNVLLRAFCTQRQMKEARSVFNKLHSRFSPNTKTMNILLLG 541
           AF RME  ++   +FG +EFNVLLRAFCTQRQMKEARSVF+K+HSRFSPNTKTMNILLLG
Sbjct: 170 AFGRMEKNVFFGREFGANEFNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLG 229

Query: 542 FKESGDITSVELFYHDMTRRGFKPDNITYNIRIDAYCKKGSF 667
           FKESGD+T+VELFYH+M RRGFKP+++TYNIRIDAYCKKG F
Sbjct: 230 FKESGDVTAVELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCF 271


>ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Cucumis sativus]
           gi|449520004|ref|XP_004167024.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g61360-like [Cucumis sativus]
          Length = 504

 Score =  318 bits (815), Expect = 6e-85
 Identities = 152/222 (68%), Positives = 186/222 (83%)
 Frame = +2

Query: 2   INDSLYPDKPLHPVLSQQIPPTALSTSIVENVLGCLFATHANGLKASEFFRYTLEAPHLC 181
           IND  +PD+PLHP L   IP    S + + +VLG LFA H+NGLKA EFF++ L      
Sbjct: 48  INDHPFPDQPLHPTLLHLIPSPLPSNTFLNDVLGQLFAAHSNGLKALEFFKFCLHHSQAP 107

Query: 182 PSADAFEKTLHILTRMRYFDKAWELMEEIKKKHPSLLTIKSMSIVLSRIARFQSFEETLE 361
           P++DAFEKTLHIL+RMRYFD++WELM EI++ HP LLT+KSMSI+LSRIA+F SFEET+E
Sbjct: 108 PTSDAFEKTLHILSRMRYFDQSWELMREIRQTHPFLLTLKSMSILLSRIAKFLSFEETIE 167

Query: 362 AFQRMEDTIYIRNKFGTDEFNVLLRAFCTQRQMKEARSVFNKLHSRFSPNTKTMNILLLG 541
           AFQRME+ +++  KFGT+EFNVLLRAFCTQRQMKEARSVF+K++SRF PN KT+N+LLLG
Sbjct: 168 AFQRMENEVFVGRKFGTEEFNVLLRAFCTQRQMKEARSVFHKMYSRFPPNIKTINLLLLG 227

Query: 542 FKESGDITSVELFYHDMTRRGFKPDNITYNIRIDAYCKKGSF 667
           FKES DITSVELFYH+M +RGFKP+ +TY+IRIDAYCKKG F
Sbjct: 228 FKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGCF 269


>ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g61360-like [Glycine max]
          Length = 491

 Score =  318 bits (814), Expect = 8e-85
 Identities = 153/222 (68%), Positives = 183/222 (82%)
 Frame = +2

Query: 2   INDSLYPDKPLHPVLSQQIPPTALSTSIVENVLGCLFATHANGLKASEFFRYTLEAPHLC 181
           IND  +P +PL P L   +PP+  STS+VEN+LG LFA+H+NGLKA EFF Y+L   H  
Sbjct: 26  INDHPFPLQPLQPTLLHLLPPSTFSTSLVENILGRLFASHSNGLKALEFFNYSLVHSHFP 85

Query: 182 PSADAFEKTLHILTRMRYFDKAWELMEEIKKKHPSLLTIKSMSIVLSRIARFQSFEETLE 361
            S  +   TLHILTRMRYFDKAW L+ +I + HPSLLT+KSMSIVLS+IA+FQSFE+TL+
Sbjct: 86  LSPASLNMTLHILTRMRYFDKAWVLLRDIARTHPSLLTLKSMSIVLSKIAKFQSFEDTLD 145

Query: 362 AFQRMEDTIYIRNKFGTDEFNVLLRAFCTQRQMKEARSVFNKLHSRFSPNTKTMNILLLG 541
            F+RMED +++  +FGTDEFNVLL+AFCTQRQMKEARSVF KL  RFSPNTK+MNILLLG
Sbjct: 146 GFRRMEDEVFVGREFGTDEFNVLLKAFCTQRQMKEARSVFAKLVPRFSPNTKSMNILLLG 205

Query: 542 FKESGDITSVELFYHDMTRRGFKPDNITYNIRIDAYCKKGSF 667
           FKESG++TSVELFYH+M RRGF PD +T+NIRIDAYCKKG F
Sbjct: 206 FKESGNVTSVELFYHEMVRRGFSPDGVTFNIRIDAYCKKGCF 247


>ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529395|gb|EEF31358.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 530

 Score =  314 bits (805), Expect = 9e-84
 Identities = 149/222 (67%), Positives = 187/222 (84%)
 Frame = +2

Query: 2   INDSLYPDKPLHPVLSQQIPPTALSTSIVENVLGCLFATHANGLKASEFFRYTLEAPHLC 181
           IND+ +P++ L+P L + + P ALST  VENVLG LFA H+NGLKA EFFR++L   H  
Sbjct: 67  INDNSFPNESLYPTLLKHLNPAALSTDFVENVLGRLFAAHSNGLKALEFFRFSLRHSHFN 126

Query: 182 PSADAFEKTLHILTRMRYFDKAWELMEEIKKKHPSLLTIKSMSIVLSRIARFQSFEETLE 361
           PS+ AFE TLHIL RMRYF+KAWELM EI K HPSLLT+KSM I+LS+IA+FQS+E+TLE
Sbjct: 127 PSSFAFEMTLHILARMRYFEKAWELMMEIGKSHPSLLTLKSMGIMLSKIAKFQSYEDTLE 186

Query: 362 AFQRMEDTIYIRNKFGTDEFNVLLRAFCTQRQMKEARSVFNKLHSRFSPNTKTMNILLLG 541
           AF+RME T+++   FGT+EFNVLL+AFC+QR++KEARSVF K+H +F+PNTKTMNILLLG
Sbjct: 187 AFKRMEKTVFVGKTFGTEEFNVLLQAFCSQREVKEARSVFQKMHDQFNPNTKTMNILLLG 246

Query: 542 FKESGDITSVELFYHDMTRRGFKPDNITYNIRIDAYCKKGSF 667
           FK++ DIT++ELFYH++ RRGFK  ++TYNIRIDAYCKKG F
Sbjct: 247 FKKARDITAMELFYHEIVRRGFKATSLTYNIRIDAYCKKGYF 288


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