BLASTX nr result

ID: Angelica23_contig00022798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022798
         (1178 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   177   4e-42
emb|CBI32919.3| unnamed protein product [Vitis vinifera]              136   9e-30
ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|2...   135   2e-29
ref|XP_003616769.1| F-box/LRR-repeat protein [Medicago truncatul...   120   7e-25
ref|XP_002866147.1| F-box family protein [Arabidopsis lyrata sub...   119   2e-24

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  177 bits (450), Expect = 4e-42
 Identities = 128/373 (34%), Positives = 194/373 (52%), Gaps = 14/373 (3%)
 Frame = -2

Query: 1165 LERFSLNCVGNYDFTRVDQWIRIVVGHNVKEINLTLNFRELYKLVQDVYICTSIEVFRLK 986
            +++F L    N +   V  WI I +   V+E++L L      +L    +IC ++ V +L 
Sbjct: 91   IKKFRLGYRDN-NLDSVYSWICIALERRVQELDLHLLIDWRVELPPMFFICKTLVVVKLS 149

Query: 985  WKILVHVPENVSLCSLRVLEFTGVKFSSYESVEKLLLSCPVLEDLVIENCKWLSGCCLSV 806
              + + +P  V L SL+ L    V++S  +S++KLL  CPVLE+LVIE  +  +   ++V
Sbjct: 150  CALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNV 209

Query: 805  CGSALK----NFSLDSYS--YLDTDVELKILIDTPALETLEIREFTSEGIFIKENLLSIT 644
               +LK     F  D ++  Y   D + K+++D P LE L I ++ S+  F+K+ L S+ 
Sbjct: 210  SNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAPNLEYLSITDYLSKDYFVKD-LPSLV 268

Query: 643  TASIDMAQKIERSVPCS-----VYGDSVFGLLKKISHVKYLTLCQSTLGALS-YASNYSF 482
             A ID+ Q  E            Y   ++ LL +IS+VK L+L   TL +LS    +Y  
Sbjct: 269  KAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRISNVKCLSLTGVTLDSLSGTIGDYKL 328

Query: 481  PTFHNLSQLELIVDAWSGWTLLPYILGSSPNLESLVFPQGLVDMXXXXXXXXXXSWSPPD 302
            PTFHN+++LE +      W  LP  L SSPNLE+LV   G  +            W  P 
Sbjct: 329  PTFHNMTRLEFLFIGGFNWDFLPNFLHSSPNLEALVIETGYTN------ELIPEGWLMPL 382

Query: 301  LVPECLSSKLKTIEIKNFQGINEEFSLVKYLLKHGRVLKTMSIDC--SLLPRDVKIQKKL 128
             VP CL   LK IEI+   G + E   V+YLLK+  VL+ M+IDC  S + ++  + KKL
Sbjct: 383  QVPACLVLHLKEIEIRRIVGEDYELEAVEYLLKNAEVLQQMTIDCHESYMDQEFCVCKKL 442

Query: 127  YKFRRGSSTCKLV 89
                RGS +C +V
Sbjct: 443  LGLPRGSRSCFVV 455


>emb|CBI32919.3| unnamed protein product [Vitis vinifera]
          Length = 411

 Score =  136 bits (343), Expect = 9e-30
 Identities = 107/364 (29%), Positives = 165/364 (45%), Gaps = 7/364 (1%)
 Frame = -2

Query: 1165 LERFSLNCVGNYDFTRVDQWIRIVVGHNVKEINLTLNFRELYKLVQDVYICTSIEVFRLK 986
            + +F L C  +   + V+ WI   +  NV+E++L  +     +L    + C ++ V +L 
Sbjct: 91   IRKFRLKCSDHELDSAVNSWICTALERNVQELDLYFDTEYPIELPPKFFFCKTLVVLKL- 149

Query: 985  WKILVHVPENVSLCSLRVLEFTGVKFSSYESVEKLLLSCPVLEDLVIENCKWLSGCCLSV 806
                                                  CPVLE+LVIE  +       +V
Sbjct: 150  --------------------------------------CPVLEELVIERWRLDEQWVFNV 171

Query: 805  CGSALKNFSLDSYSYLDTDVELKILIDTPALETLEIREFTSEGIFIKENLLSITTASIDM 626
                LK+ ++    Y       K+++D P LE L I +F SE  ++  NL S+  A +++
Sbjct: 172  SAPTLKSLAIYFSKY-------KLVVDAPNLEYLSITDFVSED-YLMSNLSSLVKAYVNV 223

Query: 625  AQKIERSVPCSVYGDSVFGLLKKISHVKYLTLCQSTLGALS-YASNYSFPTFHNLSQLEL 449
               I       +Y   ++ LL+ IS+VK+L+L   TL +LS     Y  P FH++++LEL
Sbjct: 224  GPTIRGIDDQILYRGRIYELLRGISNVKHLSLSGETLHSLSGMFCGYELPAFHSVTRLEL 283

Query: 448  IVDAWSGWTLLPYILGSSPNLESLVFPQGLVDMXXXXXXXXXXSWSPPDLVPECLSSKLK 269
             VD   G   L   L +SPNLE L+      D            W+ P  VP C+   L 
Sbjct: 284  EVDYGYGLEFLKEFLDTSPNLEILILENVNKD------ECEIEEWTLPLQVPTCVELHLN 337

Query: 268  TIEIKNFQGINEEFSLVKYLLKHGRVLKTMSIDCSLLPRDVK------IQKKLYKFRRGS 107
             +EIK F G++ E   +++LLK+ RVLK MSIDC    RD +      + KKL  F R S
Sbjct: 338  EVEIKKFDGLDYELGAIEFLLKNARVLKKMSIDC----RDWRDGQEFCVCKKLSGFTRAS 393

Query: 106  STCK 95
             +C+
Sbjct: 394  MSCE 397


>ref|XP_002316907.1| predicted protein [Populus trichocarpa] gi|222859972|gb|EEE97519.1|
            predicted protein [Populus trichocarpa]
          Length = 462

 Score =  135 bits (341), Expect = 2e-29
 Identities = 110/382 (28%), Positives = 184/382 (48%), Gaps = 21/382 (5%)
 Frame = -2

Query: 1168 NLERFSLNCVGNYDFTRVDQWIRIVVGHNVKEINLTLNFRELYKLVQDVYICTSIEVFRL 989
            ++ +F L   G+Y  +R+  WI   +  N++E+ L +   +   L + ++ C  + +  L
Sbjct: 88   SITKFRLRVNGSYPSSRMSAWISAAIKDNLEELKLWIYTADHVPLPRRIFSCEKLVILDL 147

Query: 988  KWKILVHV-PENVSLCSLRVLEFTGVKF-SSYESVEKLLLSCPVLEDLVIENCKWLSGCC 815
             ++I + +    V    L+VL    +     + S+EKLL   PVLE+L IE+    S   
Sbjct: 148  GYRIDIDLLGVGVHFPCLKVLHLQELPMLDDHASIEKLLAGSPVLEELKIEHEDCESRNV 207

Query: 814  LSVCGSALKN----FSLDSYSYLDTDVELKILIDTPALETLEIREFTSEGIFIKENLLSI 647
            L +C S+LK     F   +Y   D     ++ +DTP LE L++ +  SE + + +   S+
Sbjct: 208  LRICSSSLKRLIIRFPFVAYDEKDPGCR-ELTLDTPNLELLKLTDLVSEKLNMLQIPYSL 266

Query: 646  TTASIDMAQKIERSVPCSVYGDSVFGLLKKI-SHVKYLTLCQST-----LGALSYASNY- 488
              A++ +A K   ++    Y D    LL+ I + VK L LC +T     L  LS A +  
Sbjct: 267  VEAALSVAYKHVFTIQVDDYIDMAVQLLRPIMTIVKILRLCDTTMRTSPLQTLSDAVHKK 326

Query: 487  -----SFPTFHNLSQLELIVDAWSGWTLLPYILGSSPNLESLVFPQGLVDMXXXXXXXXX 323
                 + P F NL++LE+       W +L  IL  SP LE  +  +   +          
Sbjct: 327  LPCVGNLPDFQNLTRLEIEASGNDRWLVLHEILKCSPKLEVFILYKDSTEKTPR------ 380

Query: 322  XSWSPPDLVPECLSSKLKTIEIKNFQGINEEFSLVKYLLKHGRVLKTMSIDCS-LLPRDV 146
              W  P+ VP CL S LK IE   F+    E  + +YL+K+  VL+ M+I+    +  D 
Sbjct: 381  --WRNPEFVPRCLRSSLKVIEYVGFESELGEIEMAEYLIKNALVLEKMTIEYGWKMIHDF 438

Query: 145  K--IQKKLYKFRRGSSTCKLVF 86
            K  + ++L + RRGS+ C++VF
Sbjct: 439  KERVAERLTECRRGSTACRIVF 460


>ref|XP_003616769.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355518104|gb|AES99727.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 436

 Score =  120 bits (301), Expect = 7e-25
 Identities = 87/303 (28%), Positives = 150/303 (49%)
 Frame = -2

Query: 1081 VKEINLTLNFRELYKLVQDVYICTSIEVFRLKWKILVHVPENVSLCSLRVLEFTGVKFSS 902
            V+EI+L+L   ++Y L  +++ C ++ V +L  +  +++P ++ L  L++L         
Sbjct: 112  VEEIDLSLYSLKVY-LPCEIFACETLVVLKLVGRFYLNLPSHLHLPLLKILHLCISCIVE 170

Query: 901  YESVEKLLLSCPVLEDLVIENCKWLSGCCLSVCGSALKNFSLDSYSYLDTDVELKILIDT 722
             +++ KL   CPVLE+L  E+ ++       +C   LK   + S+       + KI I+T
Sbjct: 171  DKALMKLFYGCPVLEELYYEDVEFKCSSLFGICVPTLKRLHVRSF-------DEKIHINT 223

Query: 721  PALETLEIREFTSEGIFIKENLLSITTASIDMAQKIERSVPCSVYGDSVFGLLKKISHVK 542
            P LE L + E T    +  ENL  +  A I +    E          ++  LL  I   +
Sbjct: 224  PLLEYLVLEE-TKASNYEVENLNKLKEARIGIYFDHENKE----VKQNISNLLNGIHKTR 278

Query: 541  YLTLCQSTLGALSYASNYSFPTFHNLSQLELIVDAWSGWTLLPYILGSSPNLESLVFPQG 362
            +L L   +   L+YA    FPTF+NL  L+L +  ++   L+  +L   PNL+ L     
Sbjct: 279  FLCLDMDSTEVLTYAC-LEFPTFNNLGYLQLYLKTFNSHFLVKLLLEKCPNLDVLEI--- 334

Query: 361  LVDMXXXXXXXXXXSWSPPDLVPECLSSKLKTIEIKNFQGINEEFSLVKYLLKHGRVLKT 182
               +           W+ P +VP CLSS L T   ++++G +EEF L++Y+LK G+VL+ 
Sbjct: 335  ---IKVDDLCDNEIKWAEPTIVPSCLSSHLTTFIFRDYEGTDEEFELIRYILKSGKVLER 391

Query: 181  MSI 173
             +I
Sbjct: 392  TTI 394


>ref|XP_002866147.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297311982|gb|EFH42406.1| F-box family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 423

 Score =  119 bits (297), Expect = 2e-24
 Identities = 100/351 (28%), Positives = 164/351 (46%), Gaps = 7/351 (1%)
 Frame = -2

Query: 1117 VDQWIRIVVGHNVKEINLTL-NFRELYKLVQDVYICTSIEVFRLKWKILVHVPENVSLCS 941
            V  W+RI V   V+E+N++  +  E  +L + ++ CT++ V +L+   LV     V   S
Sbjct: 96   VGVWVRIGVDRFVRELNISYCSGEEPIRLPKCLFTCTTLAVLKLENISLVDASCYVCFQS 155

Query: 940  LRVLEFTGVKFSSYESVEKLLLSCPVLEDLVIENCKWLSGCCLSVCGSALKNFSLDSYSY 761
            ++ L    VK+   +S+ +++ SC  LEDLV++ C   +   +S+    LK  SL   S 
Sbjct: 156  VKTLHLLDVKYLDDQSLPRIISSCSSLEDLVVQRCPGDNVKVVSITAPCLKTLSLHKSSQ 215

Query: 760  LDTDVELKILIDTPALETLEIREFTSEGIFIKENLLSITTASIDMAQKIERSVPCSVYGD 581
                 +   LID P L+ ++I ++     +I EN+  +  A++D+  K            
Sbjct: 216  AFEGDDDGFLIDAPRLKRVDIEDYWGGFCYI-ENMPEVVEANVDVIYK------------ 262

Query: 580  SVFGLLKKISHVKYLTLCQSTLGALSYASNYSFPT---FHNLSQLELIVDAWSGWTLLPY 410
            +   LL  ++ VK L LC  T       S+ ++PT   F  L  LEL   A   W LL  
Sbjct: 263  NTEKLLGSLTSVKRLALCLIT-------SDAAYPTGTVFSQLVHLELCTCAPRWWDLLTR 315

Query: 409  ILGSSPNLESLVFPQGLVDMXXXXXXXXXXSWSPPDLVPECLSSKLKTIEIKNFQGINEE 230
            +   SP L  L   Q  +             W  P  +P+CL   L+T + + ++G  ++
Sbjct: 316  LFEDSPKLRVLKLRQKHI----RRAPSPRACWKQPVSLPKCLLFHLETFKWELYEGSQKQ 371

Query: 229  FSLVKYLLKHGRVLKTMSID---CSLLPRDVKIQKKLYKFRRGSSTCKLVF 86
              +  ++LKH   LKT  I     S L    ++ K+L    RGSSTC+L+F
Sbjct: 372  KEVATFILKHAIRLKTAIISPKPTSTLLEKHEMLKELSSSPRGSSTCELLF 422


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