BLASTX nr result

ID: Angelica23_contig00022759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022759
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinen...   134   9e-30
ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like...   130   1e-28
emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]   130   1e-28
ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like...   123   2e-26
ref|XP_003543338.1| PREDICTED: pre-mRNA-processing factor 6-like...   122   5e-26

>gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinensis]
          Length = 1023

 Score =  134 bits (337), Expect = 9e-30
 Identities = 72/103 (69%), Positives = 82/103 (79%)
 Frame = +1

Query: 229 IESKTTLPPHLQRIFLSSRRLLIDESNAIDSISSLGVNRHSTLVLHVPLLGGMQAPVTNA 408
           IE K+ +P  LQR+FLSSRRL+  +  A  +IS+ GV  +STL L+ PLLGGMQAPV   
Sbjct: 30  IERKSGVPVTLQRLFLSSRRLIGGDGTA--TISAFGVGLNSTLTLYFPLLGGMQAPVV-- 85

Query: 409 PKARLELLNAKPPANYVAGLGRGATGFTTRSDIGPARAAPDLP 537
           PK+RLE LN KPP NYVAGLGRGATGFTTRSDIGPARAAPDLP
Sbjct: 86  PKSRLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLP 128


>ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like [Vitis vinifera]
          Length = 1023

 Score =  130 bits (327), Expect = 1e-28
 Identities = 71/103 (68%), Positives = 77/103 (74%)
 Frame = +1

Query: 229 IESKTTLPPHLQRIFLSSRRLLIDESNAIDSISSLGVNRHSTLVLHVPLLGGMQAPVTNA 408
           IE +  +P  LQRIFL+ RRL+ DES  I   + LGV   S L LH+PL GGMQAPV   
Sbjct: 30  IERELGIPLSLQRIFLNPRRLIGDESALI---AELGVRSDSALTLHLPLFGGMQAPVV-- 84

Query: 409 PKARLELLNAKPPANYVAGLGRGATGFTTRSDIGPARAAPDLP 537
           PK RLE LN KPP NYVAGLGRGATGFTTRSDIGPARAAPDLP
Sbjct: 85  PKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLP 127


>emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]
          Length = 1023

 Score =  130 bits (327), Expect = 1e-28
 Identities = 71/103 (68%), Positives = 77/103 (74%)
 Frame = +1

Query: 229 IESKTTLPPHLQRIFLSSRRLLIDESNAIDSISSLGVNRHSTLVLHVPLLGGMQAPVTNA 408
           IE +  +P  LQRIFL+ RRL+ DES  I   + LGV   S L LH+PL GGMQAPV   
Sbjct: 30  IERELGIPLSLQRIFLNPRRLIGDESALI---AELGVRSDSALTLHLPLFGGMQAPVV-- 84

Query: 409 PKARLELLNAKPPANYVAGLGRGATGFTTRSDIGPARAAPDLP 537
           PK RLE LN KPP NYVAGLGRGATGFTTRSDIGPARAAPDLP
Sbjct: 85  PKPRLEFLNTKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLP 127


>ref|XP_003540356.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1041

 Score =  123 bits (309), Expect = 2e-26
 Identities = 69/106 (65%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
 Frame = +1

Query: 229 IESKTTLPPHLQRIFLS-SRRLLIDESNAIDS--ISSLGVNRHSTLVLHVPLLGGMQAPV 399
           I+   TLP   QR+FLS SRRL  D   + DS  IS LGV  +STL LHVP LGG   P 
Sbjct: 30  IQQTLTLPISHQRLFLSHSRRLTADNDGSDDSLLISDLGVGPYSTLTLHVPFLGGTNPPA 89

Query: 400 TNAPKARLELLNAKPPANYVAGLGRGATGFTTRSDIGPARAAPDLP 537
              PK R + LN+KPP NYVAGLGRGATGFTTRSDIGPARAAPDLP
Sbjct: 90  V--PKPRFDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLP 133


>ref|XP_003543338.1| PREDICTED: pre-mRNA-processing factor 6-like [Glycine max]
          Length = 1034

 Score =  122 bits (305), Expect = 5e-26
 Identities = 69/106 (65%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
 Frame = +1

Query: 229 IESKTTLPPHLQRIFLS-SRRLLIDESNAIDS--ISSLGVNRHSTLVLHVPLLGGMQAPV 399
           I+   TLP   QR+FLS SRRL  D   + DS  IS LGV  +STL LHVP LGG   P 
Sbjct: 30  IQHILTLPISHQRLFLSHSRRLSADNDGSDDSLLISDLGVGPYSTLTLHVPFLGGTNPPA 89

Query: 400 TNAPKARLELLNAKPPANYVAGLGRGATGFTTRSDIGPARAAPDLP 537
              PK R + LN+KPP NYVAGLGRGATGFTTRSDIGPARAAPDLP
Sbjct: 90  V--PKPRFDFLNSKPPPNYVAGLGRGATGFTTRSDIGPARAAPDLP 133


Top