BLASTX nr result

ID: Angelica23_contig00022755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022755
         (1068 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273382.1| PREDICTED: transcription initiation factor T...   249   8e-64
ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|2...   235   1e-59
ref|XP_004165443.1| PREDICTED: transcription initiation factor T...   233   6e-59
ref|XP_003525647.1| PREDICTED: transcription initiation factor T...   231   2e-58
ref|XP_004137463.1| PREDICTED: transcription initiation factor T...   228   1e-57

>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            isoform 2 [Vitis vinifera]
          Length = 1345

 Score =  249 bits (636), Expect = 8e-64
 Identities = 147/271 (54%), Positives = 175/271 (64%), Gaps = 4/271 (1%)
 Frame = -3

Query: 1066 LMPSHNGVLTISCIRTLTQIALKLNGFIPFDLVFELIKQFRSPDAILEVRIEATRALLDL 887
            LMPS+NG+LTISCIRTLTQI LKL+GFIP D V EL+K FR   AI +VRIEA+RALL L
Sbjct: 843  LMPSYNGILTISCIRTLTQIGLKLSGFIPLDRVIELVKPFRDFQAIWQVRIEASRALLGL 902

Query: 886  EFQCSGIDVALMRFIAYLEEESSLKGQVKLGVHAVRLCQL-AGSTHDNTIKIETLVALLC 710
            EF   GID AL  FI Y+EEE S++GQVKLGVHA+RLCQ+  GS  DN IK  TLVALL 
Sbjct: 903  EFHFKGIDAALSLFIKYVEEEPSIRGQVKLGVHAMRLCQIKGGSESDNDIKSSTLVALLR 962

Query: 709  LLECPVAFNNVKLRHYLFCILQVLAGRPPTLSGVPRDEKLQMGHAEACSEMKNIFATLVK 530
            LLE  +AFNNV LRH+LFCIL++LAGR PTL GVPRD+  QM  AE CSE KN F T+VK
Sbjct: 963  LLESRIAFNNVFLRHHLFCILRILAGRLPTLYGVPRDQIPQMDPAEICSEQKNGFITIVK 1022

Query: 529  QSK---PPVCTLNPTNEDASVVPGATREVDTEEIKSPLPLLETVTLSHGVPNFPESKEAD 359
            ++K   PPV T N  + D   +P A                              S+EAD
Sbjct: 1023 ETKSLEPPVDTPN-VSHDGLALPEA------------------------------SREAD 1051

Query: 358  TLFNTHEQNVPVVDLSHDGSTIPESLAEIDD 266
            T+ N+HE+ +PVV +    S       E D+
Sbjct: 1052 TVSNSHERKMPVVKIRVRQSAASSRAEEADN 1082


>ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|222868453|gb|EEF05584.1|
            predicted protein [Populus trichocarpa]
          Length = 1359

 Score =  235 bits (600), Expect = 1e-59
 Identities = 138/280 (49%), Positives = 175/280 (62%), Gaps = 14/280 (5%)
 Frame = -3

Query: 1066 LMPSHNGVLTISCIRTLTQIALKLNGFIPFDLVFELIKQFRSPDAILEVRIEATRALLDL 887
            LM S+NG+LTISCIRTLTQIALKL+G I  D VFELIK FR    I ++RIEA+RALLDL
Sbjct: 838  LMLSYNGILTISCIRTLTQIALKLSGSIHHDHVFELIKPFRDFKTIWQIRIEASRALLDL 897

Query: 886  EFQCSGIDVALMRFIAYLEEESSLKGQVKLGVHAVRLCQLAG-STHDNTIKIETLVALLC 710
            EF C G+D AL  FI YLEEE SL+GQ KLG HA+RLCQ+   S  ++ IK  TL+AL+ 
Sbjct: 898  EFHCKGMDAALSLFITYLEEEPSLRGQAKLGAHAMRLCQIQDESDSEDAIKCTTLLALIR 957

Query: 709  LLECPVAFNNVKLRHYLFCILQVLAGRPPTLSGVPRDEKLQMGHAEACSEMKNIFATLVK 530
            LLE  + FNN  LRH+LFCILQ+LAGR  TL G+PRD  L +G +E CS+ +NIFA LV 
Sbjct: 958  LLEGHIGFNNTILRHHLFCILQILAGRAATLYGIPRDRTLCIGDSETCSDPRNIFAGLVT 1017

Query: 529  QSKP--PVCTLNPTNEDASVVPGATREVD----TEEIKSPLPLLETVTLSHGVPNFPE-- 374
            ++KP  P   +    +D    P A +E D     ++ K  + + E  +    VP   +  
Sbjct: 1018 ETKPLEPPMEIPKLAQDNFAFPEAIKEADIISNKDQHKMDMAIPEEASEEVAVPEASKET 1077

Query: 373  -----SKEADTLFNTHEQNVPVVDLSHDGSTIPESLAEID 269
                 SKE D + N+HE+  PVV +    S       E D
Sbjct: 1078 DIPVASKEEDNISNSHERRRPVVKIRVKHSAASSRAEETD 1117


>ref|XP_004165443.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            [Cucumis sativus]
          Length = 1362

 Score =  233 bits (594), Expect = 6e-59
 Identities = 145/329 (44%), Positives = 191/329 (58%), Gaps = 2/329 (0%)
 Frame = -3

Query: 1066 LMPSHNGVLTISCIRTLTQIALKLNGFIPFDLVFELIKQFRSPDAILEVRIEATRALLDL 887
            LMPS+NG+LTISCIRTLTQIALKL+G +  D + ELI+ FR  +++ +VRIEATR+LLDL
Sbjct: 833  LMPSYNGILTISCIRTLTQIALKLSGLLSLDRIIELIRPFRDFNSMWQVRIEATRSLLDL 892

Query: 886  EFQCSGIDVALMRFIAYLEEESSLKGQVKLGVHAVRLCQLAGSTHDN-TIKIETLVALLC 710
            E+ C+GID  L+ FI YLEEE+SL+GQVKL VH +RLCQ+   +  N  +  +TLVALL 
Sbjct: 893  EYHCNGIDATLLLFIKYLEEENSLRGQVKLAVHVMRLCQIMRRSGSNDVVNNDTLVALLL 952

Query: 709  LLECPVAFNNVKLRHYLFCILQVLAGRPPTLSGVPRDEK-LQMGHAEACSEMKNIFATLV 533
            LLE  +AFNNV LRHYLFCILQVL+GR PTL GVPR+ K L MG     SE K +  +L+
Sbjct: 953  LLEGNMAFNNVYLRHYLFCILQVLSGRSPTLYGVPREYKTLHMGDTGTFSEQKRMLTSLI 1012

Query: 532  KQSKPPVCTLNPTNEDASVVPGATREVDTEEIKSPLPLLETVTLSHGVPNFPESKEADTL 353
             +  PP                   E  +    +P+P +   TLS    + P  +     
Sbjct: 1013 PEFNPP-------------------EPSSVSAVAPMPCI-PATLSSEPLHVPTPR----- 1047

Query: 352  FNTHEQNVPVVDLSHDGSTIPESLAEIDDIYKCHEQNQKIVQQDGSMFVECARKLDTVCC 173
                  N+ V +LS +   I E                    +     VE  R+  +V  
Sbjct: 1048 ----PDNLAVPELSKEEGAIAED------------------PKQAMAIVEAPREAASVSS 1085

Query: 172  SQERRKPIVKLKVKQSVATGKAEDAENAT 86
            S ER+ P+VK+KV+ S AT +A DA+N T
Sbjct: 1086 SHERKLPVVKIKVRSSAATSRA-DADNLT 1113


>ref|XP_003525647.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            [Glycine max]
          Length = 1388

 Score =  231 bits (590), Expect = 2e-58
 Identities = 138/276 (50%), Positives = 173/276 (62%), Gaps = 28/276 (10%)
 Frame = -3

Query: 1066 LMPSHNGVLTISCIRTLTQIALKLNGFIPFDLVFELIKQFRSPDAILEVRIEATRALLDL 887
            LMPS+NG+LTISCIRTLTQIALKL+GFIP D V+EL+K FR   A+ +V+IEA++ALLDL
Sbjct: 844  LMPSYNGILTISCIRTLTQIALKLSGFIPLDRVYELVKPFRDLKALWQVQIEASKALLDL 903

Query: 886  EFQCSGIDVALMRFIAYLEEESSLKGQVKLGVHAVRLCQLA-GSTHDNTIKIETLVALLC 710
            EF C G+D AL+ FI Y+EEE SL+GQ+KL  H +RLCQ+  G   ++ I  +TLV++L 
Sbjct: 904  EFHCKGMDSALLLFIKYIEEEHSLRGQLKLATHVMRLCQMRDGLNSNDEITSQTLVSMLN 963

Query: 709  LLECPVAFNNVKLRHYLFCILQVLAGRPPTLSGVPRDEK-LQMGHAEACSEMKNIFATLV 533
            LLE  +AFNNV LRHYLFCILQ+LA RPPTL G+PR  + L M  AEAC+  KNIFA L 
Sbjct: 964  LLEGRIAFNNVSLRHYLFCILQILARRPPTLHGIPRGNRMLHMSLAEACNYQKNIFA-LD 1022

Query: 532  KQSKP---PVCTLNPTNEDASVVPGATREVDTEEIKSP--------LPLLETVTLSHGVP 386
             +SKP   P  T N T      + G    VD      P        L  L+  +L     
Sbjct: 1023 SESKPLDLPSSTKNLTQNLGPTMEGLRDAVDEAPKDQPCEASTQVHLEALKEASLEKPKE 1082

Query: 385  NFPE---------------SKEADTLFNTHEQNVPV 323
             F E               SKE DT+ N+HE+  P+
Sbjct: 1083 VFTEFPQEAPIEAPNPNEVSKEVDTVSNSHERKRPI 1118


>ref|XP_004137463.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
            [Cucumis sativus]
          Length = 1362

 Score =  228 bits (582), Expect = 1e-57
 Identities = 143/329 (43%), Positives = 190/329 (57%), Gaps = 2/329 (0%)
 Frame = -3

Query: 1066 LMPSHNGVLTISCIRTLTQIALKLNGFIPFDLVFELIKQFRSPDAILEVRIEATRALLDL 887
            LMPS+NG+LTISCIRTLTQIALKL+G +  D + ELI+ FR  +++ +VRIEATR+LLDL
Sbjct: 833  LMPSYNGILTISCIRTLTQIALKLSGLLSLDRIIELIRPFRDFNSMWQVRIEATRSLLDL 892

Query: 886  EFQCSGIDVALMRFIAYLEEESSLKGQVKLGVHAVRLCQLAGSTHDN-TIKIETLVALLC 710
            E+ C+GID  L+ FI YLEEE+SL+GQVKL VH +RLCQ+   +  N  +  +TLVALL 
Sbjct: 893  EYHCNGIDATLLLFIKYLEEENSLRGQVKLAVHVMRLCQIMRRSGSNDVVNNDTLVALLL 952

Query: 709  LLECPVAFNNVKLRHYLFCILQVLAGRPPTLSGVPRDEK-LQMGHAEACSEMKNIFATLV 533
            LLE  +AFNNV LRHYLF ILQVL+GR PTL GVPR+ K L MG     SE K +  +++
Sbjct: 953  LLEGNMAFNNVYLRHYLFSILQVLSGRSPTLYGVPREYKTLHMGDTGTFSEQKRMLTSII 1012

Query: 532  KQSKPPVCTLNPTNEDASVVPGATREVDTEEIKSPLPLLETVTLSHGVPNFPESKEADTL 353
             +  PP                   E  +    +P+P +   TLS    + P  +     
Sbjct: 1013 PEFNPP-------------------EPSSVSAVAPMPCI-PATLSSEPLHVPTPR----- 1047

Query: 352  FNTHEQNVPVVDLSHDGSTIPESLAEIDDIYKCHEQNQKIVQQDGSMFVECARKLDTVCC 173
                  N+ V +LS +   I E                    +     VE  R+  +V  
Sbjct: 1048 ----PDNLAVPELSKEEGAIAED------------------PKQAMAIVEAPREAASVSS 1085

Query: 172  SQERRKPIVKLKVKQSVATGKAEDAENAT 86
            S ER+ P+VK+KV+ S AT +A DA+N T
Sbjct: 1086 SHERKLPVVKIKVRSSAATSRA-DADNLT 1113


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