BLASTX nr result

ID: Angelica23_contig00022668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022668
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat...   152   4e-35
emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]   152   4e-35
ref|XP_002511392.1| pentatricopeptide repeat-containing protein,...   139   5e-31
ref|NP_171850.1| pentatricopeptide repeat-containing protein [Ar...   130   2e-28
ref|XP_002892165.1| pentatricopeptide repeat-containing protein ...   127   2e-27

>ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g03510 [Vitis vinifera] gi|298205226|emb|CBI17285.3|
           unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  152 bits (384), Expect = 4e-35
 Identities = 69/106 (65%), Positives = 86/106 (81%), Gaps = 2/106 (1%)
 Frame = -3

Query: 319 HVNNARHEEALSLFHHVH--STLSLDPFVFPLALKSCTAIRRPHLGTSIHCHLIKTSHIT 146
           HVN  RH +ALSLFHH+H  S  +LD FVFPLALKSC A  RP+LG +IH H+ K S + 
Sbjct: 21  HVNQGRHHDALSLFHHMHASSAPALDAFVFPLALKSCAAAHRPNLGAAIHAHVTKFS-LV 79

Query: 145 NNPYIACALIDMYGKCVSISSARQVFDEVPERNVIMWNAMISIYAH 8
           +NP++ACAL+DMYGKCVS+SSAR +FDE+P RN+++WNAMISIY H
Sbjct: 80  SNPFVACALVDMYGKCVSVSSARHLFDEIPHRNIVVWNAMISIYTH 125


>emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
          Length = 513

 Score =  152 bits (384), Expect = 4e-35
 Identities = 69/106 (65%), Positives = 86/106 (81%), Gaps = 2/106 (1%)
 Frame = -3

Query: 319 HVNNARHEEALSLFHHVH--STLSLDPFVFPLALKSCTAIRRPHLGTSIHCHLIKTSHIT 146
           HVN  RH +ALSLFHH+H  S  +LD FVFPLALKSC A  RP+LG +IH H+ K S + 
Sbjct: 21  HVNQGRHHDALSLFHHMHASSAPALDAFVFPLALKSCAAAHRPNLGAAIHAHVTKFS-LV 79

Query: 145 NNPYIACALIDMYGKCVSISSARQVFDEVPERNVIMWNAMISIYAH 8
           +NP++ACAL+DMYGKCVS+SSAR +FDE+P RN+++WNAMISIY H
Sbjct: 80  SNPFVACALVDMYGKCVSVSSARHLFDEIPHRNIVVWNAMISIYTH 125


>ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223550507|gb|EEF51994.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 441

 Score =  139 bits (349), Expect = 5e-31
 Identities = 61/106 (57%), Positives = 85/106 (80%), Gaps = 2/106 (1%)
 Frame = -3

Query: 319 HVNNARHEEALSLFHHVHSTL--SLDPFVFPLALKSCTAIRRPHLGTSIHCHLIKTSHIT 146
           HVN   H +AL+LF+H+ ++L  SLDP+VFPL LKSC+A+  P LGTS+H H++K   ++
Sbjct: 37  HVNRGLHHDALTLFYHMQTSLALSLDPYVFPLVLKSCSAVLCPQLGTSVHAHIVKMGFLS 96

Query: 145 NNPYIACALIDMYGKCVSISSARQVFDEVPERNVIMWNAMISIYAH 8
           N P++A AL+DMYGKC  I SAR++FDE+P+RNV++WNAMIS+Y H
Sbjct: 97  N-PFVASALVDMYGKCACIFSARKLFDEIPQRNVVVWNAMISLYTH 141


>ref|NP_171850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180302|sp|Q9LR72.1|PPR7_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g03510 gi|9280666|gb|AAF86535.1|AC002560_28
           F21B7.13 [Arabidopsis thaliana]
           gi|332189459|gb|AEE27580.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 429

 Score =  130 bits (326), Expect = 2e-28
 Identities = 60/107 (56%), Positives = 80/107 (74%), Gaps = 2/107 (1%)
 Frame = -3

Query: 319 HVNNARHEEALSLFHHVHST--LSLDPFVFPLALKSCTAIRRPHLGTSIHCHLIKTSHIT 146
           + N   HE+AL+LF  +HS+  L LD  VF LALKSC A  RP LG S+H H +K S+  
Sbjct: 22  YANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSVHAHSVK-SNFL 80

Query: 145 NNPYIACALIDMYGKCVSISSARQVFDEVPERNVIMWNAMISIYAHC 5
           +NP++ CAL+DMYGKC+S+S AR++FDE+P+RN ++WNAMIS Y HC
Sbjct: 81  SNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHC 127


>ref|XP_002892165.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338007|gb|EFH68424.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 429

 Score =  127 bits (318), Expect = 2e-27
 Identities = 58/107 (54%), Positives = 79/107 (73%), Gaps = 2/107 (1%)
 Frame = -3

Query: 319 HVNNARHEEALSLFHHVHST--LSLDPFVFPLALKSCTAIRRPHLGTSIHCHLIKTSHIT 146
           + N   HE+AL+LF  +HS+  L LD  VF LALKSC A   P LG S+H H +K S+  
Sbjct: 22  YANQGFHEQALTLFRQMHSSFALPLDAHVFSLALKSCAAAFHPVLGGSVHAHSVK-SNFL 80

Query: 145 NNPYIACALIDMYGKCVSISSARQVFDEVPERNVIMWNAMISIYAHC 5
           +NP++ CAL+DMYGKC+S++ AR++FDE+P+RN ++WNAMIS Y HC
Sbjct: 81  SNPFVGCALLDMYGKCLSVTHARKLFDEIPQRNAVVWNAMISHYTHC 127


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