BLASTX nr result

ID: Angelica23_contig00022647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022647
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein ...   123   3e-26
gb|ACF74325.1| unknown [Arachis hypogaea]                             121   1e-25
ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycin...   120   2e-25
ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arab...   116   3e-24
ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein ...   115   9e-24

>ref|XP_003632106.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Vitis vinifera] gi|296084274|emb|CBI24662.3| unnamed
           protein product [Vitis vinifera]
          Length = 108

 Score =  123 bits (308), Expect = 3e-26
 Identities = 62/90 (68%), Positives = 75/90 (83%), Gaps = 2/90 (2%)
 Frame = -3

Query: 566 RWISSRHSSTKLFVG--GLSYDTNETVLRDAFDRHGEIIEAKVICDRVSGKSQGYGFVQF 393
           RW+ SR S  KLF+G  GLSYDTNET+L+DAF ++GEIIE KVICD VSGKS+GYGFVQF
Sbjct: 18  RWLVSRGSCRKLFIGDAGLSYDTNETILKDAFGQYGEIIEVKVICDHVSGKSKGYGFVQF 77

Query: 392 TSENAANKALEEMNDKLLDGRNIRVHYALK 303
           TS++ A+ AL+EM+ + LDGRNIRV YA K
Sbjct: 78  TSDDDAHIALKEMDGQSLDGRNIRVTYAHK 107


>gb|ACF74325.1| unknown [Arachis hypogaea]
          Length = 112

 Score =  121 bits (304), Expect = 1e-25
 Identities = 59/91 (64%), Positives = 73/91 (80%)
 Frame = -3

Query: 572 FSRWISSRHSSTKLFVGGLSYDTNETVLRDAFDRHGEIIEAKVICDRVSGKSQGYGFVQF 393
           FS  +  RHSST L V GLSYDTNETVLRDAF++HGE+IE KVICD V+GKS+GYGFV+F
Sbjct: 21  FSPLLFPRHSSTNLLVTGLSYDTNETVLRDAFEQHGELIEVKVICDHVTGKSKGYGFVRF 80

Query: 392 TSENAANKALEEMNDKLLDGRNIRVHYALKR 300
           T+E +A    +EM+ K++DGR IRV YA K+
Sbjct: 81  TTETSAATGRKEMHKKIIDGRRIRVCYAHKQ 111


>ref|NP_001236472.1| uncharacterized protein LOC100306540 [Glycine max]
           gi|255628821|gb|ACU14755.1| unknown [Glycine max]
          Length = 146

 Score =  120 bits (302), Expect = 2e-25
 Identities = 59/82 (71%), Positives = 67/82 (81%)
 Frame = -3

Query: 548 HSSTKLFVGGLSYDTNETVLRDAFDRHGEIIEAKVICDRVSGKSQGYGFVQFTSENAANK 369
           HSSTKLFV GLSYDTNE +LRDAF +HGEIIE KVICD V+GKS+GYGFV+F SE  A  
Sbjct: 55  HSSTKLFVTGLSYDTNEPILRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFVSETTAAA 114

Query: 368 ALEEMNDKLLDGRNIRVHYALK 303
           A +EMN ++LDGR IRV YA K
Sbjct: 115 ARKEMNGQILDGRRIRVSYAHK 136


>ref|XP_002862718.1| hypothetical protein ARALYDRAFT_359421 [Arabidopsis lyrata subsp.
           lyrata] gi|297308404|gb|EFH38976.1| hypothetical protein
           ARALYDRAFT_359421 [Arabidopsis lyrata subsp. lyrata]
          Length = 113

 Score =  116 bits (291), Expect = 3e-24
 Identities = 56/86 (65%), Positives = 70/86 (81%)
 Frame = -3

Query: 566 RWISSRHSSTKLFVGGLSYDTNETVLRDAFDRHGEIIEAKVICDRVSGKSQGYGFVQFTS 387
           R+++ R S +KLFVGGLSYDTNE VL++ F+++GE+IE KVICD  SGKS+GYGFV F S
Sbjct: 17  RYLTIRGSCSKLFVGGLSYDTNEPVLKNEFEKYGEVIEVKVICDHKSGKSKGYGFVLFDS 76

Query: 386 ENAANKALEEMNDKLLDGRNIRVHYA 309
           E AA  AL  MN++LL+GRNIRV YA
Sbjct: 77  EEAAASALASMNNQLLEGRNIRVEYA 102


>ref|XP_003531992.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 146

 Score =  115 bits (287), Expect = 9e-24
 Identities = 58/82 (70%), Positives = 65/82 (79%)
 Frame = -3

Query: 548 HSSTKLFVGGLSYDTNETVLRDAFDRHGEIIEAKVICDRVSGKSQGYGFVQFTSENAANK 369
           HSS KLFV GLSYDTNE VLRDAF +HGEIIE KVICD V+GKS+GYGFV+F SE  A  
Sbjct: 55  HSSIKLFVTGLSYDTNEPVLRDAFGQHGEIIEVKVICDHVTGKSRGYGFVRFLSETIAAA 114

Query: 368 ALEEMNDKLLDGRNIRVHYALK 303
             +EMN ++LDGR IRV YA K
Sbjct: 115 THKEMNGQILDGRCIRVSYAHK 136


Top