BLASTX nr result

ID: Angelica23_contig00022573 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022573
         (2443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatul...    99   4e-18
ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat pro...    97   2e-17
ref|NP_001147018.1| ribosomal RNA apurinic site specific lyase [...    88   9e-15
ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|2...    85   8e-14
ref|NP_974861.1| FBD-associated F-box protein [Arabidopsis thali...    83   3e-13

>ref|XP_003598910.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355487958|gb|AES69161.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 354

 Score = 99.4 bits (246), Expect = 4e-18
 Identities = 82/306 (26%), Positives = 142/306 (46%), Gaps = 33/306 (10%)
 Frame = +3

Query: 183  RISRLPDDLLHRILKFVDTKLGVQTSALSKRWKFVWTTLPFLKFEWDQICAATNTTNLTR 362
            R+S LPD ++  IL F +TK   QT  LSKRWK +W  +  LK            T    
Sbjct: 13   RLSDLPDSVVLHILSFFNTKEAAQTCILSKRWKNLWKFVTTLKLSTRHFETIHPFTKFVS 72

Query: 363  HVLNHRNHQSQISSLE---IAYLPTSLIVKFIEYAISHHVQDLNVQFRSDHKPFKLSNFS 533
            HVL+HR+  + + +L+    + +   L+ K ++YA+SH VQ L +   +D + F    FS
Sbjct: 73   HVLSHRDDSTALQALDSHRASIVEAYLLKKIVKYAVSHSVQQLQISVDADFQCFPPCFFS 132

Query: 534  SNSIRKLVLRMKPGDSLLESDCWDLPALSTLHFKCYVGY---------ISIVKWVEDKLL 686
             N++  L L +  G + L  +  +LPAL++L  + +V +          S  K +   ++
Sbjct: 133  CNTLTSLKLSL--GFNTLFPNFLNLPALTSLSLRSFVFHNSDDGRVEPFSKFKMLNSLII 190

Query: 687  EQYLIC--------LPALRDLWLQHWDLQSF---AFSLPELTTLLLRICKLPNKVW---- 821
            +  ++C         P L  L +    LQS+     S+P L T     C +PNK++    
Sbjct: 191  DSCMVCDAQNLCISSPKLVSLTI----LQSYFGIELSVPSLHTFTFTGCTIPNKIYGSKS 246

Query: 822  NLPALKSLTLDEVDFPENTR------DLFTAVVNLQNLTLSYNKVTTHNCFITCPELVNL 983
            NL  +K + +D     E+ +         +    +++LT+S + +         PEL  +
Sbjct: 247  NLSTIKHVNIDLPSVWESAKTSSALLSWLSEFAGIESLTVSLDAL---KVLSLVPELSKV 303

Query: 984  EIKTLY 1001
            E+ +L+
Sbjct: 304  ELPSLH 309


>ref|XP_003529796.1| PREDICTED: putative F-box/FBD/LRR-repeat protein At1g78840-like
            [Glycine max]
          Length = 449

 Score = 97.4 bits (241), Expect = 2e-17
 Identities = 107/389 (27%), Positives = 154/389 (39%), Gaps = 29/389 (7%)
 Frame = +3

Query: 183  RISRLPDDLLHRILKFVDTKLGVQTSALSKRWKFVWTTLPFLKFEWDQICAATNTTNLTR 362
            R+S +PD L+H IL F++TK  +QT  LSKRW+++W ++P L F         N      
Sbjct: 57   RLSDMPDCLIHHILSFMETKDAIQTCVLSKRWRYLWASVPCLSFSSKSFMRLVNFKKFVL 116

Query: 363  HVLNHRNHQSQISSLEIAY-------LPTSLIVKFIEYAISHHVQDLNVQFR-------- 497
             VLNHR+  S    L + Y           L+ K IEYA SH V+++ +  R        
Sbjct: 117  WVLNHRD--SSHVKLLVYYRFGVDYTTDQGLLNKVIEYAASHGVEEIKINLRAKTAGRTS 174

Query: 498  -SDHKPFKLSNFSSNSIRKLVLRMKPGDSLLESDCWDLPALSTLHFKCYVGYISIVKWVE 674
             S      LS F+  S++KL L          +DC      S L      G  S+     
Sbjct: 175  GSPPVEIPLSLFTCQSLKKLEL----------TDCHPTNGSSPL------GCTSL----- 213

Query: 675  DKLLEQYLICLPALRDLWLQHWDLQSFAFSLPELTTLLLR---IC----KLPNKVWNLPA 833
            D L  +     PA  D       L    F    LTTL L    +C       +   N   
Sbjct: 214  DMLHLEQFSMHPAAADFSNPFASLAEL-FGFTTLTTLHLNNFILCYTGTDCLDPFANCVH 272

Query: 834  LKSLTLDEVDFPE--NTRDLFTAVVNLQNLTLSYNKVTTHNCFITCPELVNLEIKTLYKH 1007
            LK+L L E+ F    N++D   +   L NL L  N+                        
Sbjct: 273  LKNLHLSEMSFNSDLNSKDFVISAPKLSNLNLMCNRF----------------------- 309

Query: 1008 FRGIPKCTIVVFAPKLSNFTSVGIFPITFEESKLANVNVKLRGWTDDKY----CSREELK 1175
                 KC IVV AP+LSNF  +   P  F E +L +++  +    +  Y    C R + K
Sbjct: 310  -----KCKIVVAAPQLSNFIYLYSTPCAFFEFRLPSMDGLIIDIHEPHYRFEKCRRRKRK 364

Query: 1176 KCYQQFTVMLPGFGSAKILNLDLEVIEAL 1262
            +       ML G  SA+ + L    ++ +
Sbjct: 365  ETLHGLINMLRGHHSAEAVKLSFSTVKVI 393


>ref|NP_001147018.1| ribosomal RNA apurinic site specific lyase [Zea mays]
           gi|195606500|gb|ACG25080.1| ribosomal RNA apurinic site
           specific lyase [Zea mays]
          Length = 419

 Score = 88.2 bits (217), Expect = 9e-15
 Identities = 82/281 (29%), Positives = 131/281 (46%), Gaps = 35/281 (12%)
 Frame = +3

Query: 186 ISRLPDDLLHRILKFVDTKLGVQTSALSKRWKFVWTTLPFLKF--EWDQICAATNTTNLT 359
           +SRLPD+LL RIL  V TK+ V TS LSKRWKF+W +LP L+F    + +    N  N  
Sbjct: 4   LSRLPDELLVRILSLVPTKVVVSTSILSKRWKFLWMSLPKLEFVDRDESLLVLKNFVNKN 63

Query: 360 RHVLNHRNHQSQISSL---EIAYLPTSLIVKFIEYAISHHVQDLNVQFRSDHKPFKLSN- 527
             +      QS + SL       +    I +++E A+S H+++L+V + SD+K   + N 
Sbjct: 64  LPLHRAPVIQSFLLSLYESREKNIKPEDIRQWVEIAVSRHLRELDVSYSSDNKENMVPNS 123

Query: 528 -FSSNSIRKLVLRMKPGDSLLESDCWDLPALSTLHFKCYVGYISIVKWVEDKLLEQYLIC 704
            F+  S+  L LR      +  + C  LP+L TL        + +V + + K  E  L  
Sbjct: 124 LFACKSLVVLKLRFLTLMDVPSTAC--LPSLKTL-------LLELVVYEDQKPFEALLSI 174

Query: 705 LPALRDL--WLQHWD-LQSFAFSLPELTTLLLRIC------------------------- 800
            P L DL  W +  + +Q F  ++P L  L L +                          
Sbjct: 175 CPVLEDLEVWFREDESIQEFTINVPSLRKLCLHVSYYWSSLERYEIDTPCLEYLELADWN 234

Query: 801 KLPNKVWNLPALKSLTLDEVDFPENTRDLFTAVVNLQNLTL 923
             P  V N+P L+   +D V F    +++  +V ++++LT+
Sbjct: 235 DSPCLVKNMPKLEKAHVDVVSFA--VKNVIGSVASVKHLTV 273


>ref|XP_002331321.1| predicted protein [Populus trichocarpa] gi|222873904|gb|EEF11035.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score = 85.1 bits (209), Expect = 8e-14
 Identities = 84/263 (31%), Positives = 125/263 (47%), Gaps = 18/263 (6%)
 Frame = +3

Query: 183 RISRLPDDLLHRILKFVDTKLGVQTSALSKRWKFVWTTLPFLKFEWDQICAATNT----- 347
           RIS LP+ LLHRIL FVD    VQT  LSKRW  VW + P+L F ++   +  N+     
Sbjct: 17  RISTLPNVLLHRILSFVDAVQVVQTCVLSKRWMNVWKSHPYLDFNFETFSSLINSDYYED 76

Query: 348 -----TNLTRHVLNHRNHQSQIS-SLEI-AYLPTSLIVKFIEYAISHHVQDLNVQFRSDH 506
                T+    VL  RN+   I  SL++  +   SL+   I YA+ HH +++ +      
Sbjct: 77  EMVNFTDFINQVLVRRNNFKAIKISLDLCGHTRYSLVESLIYYAVKHHAEEICIDTACRD 136

Query: 507 KPFKLSN--FSSNSIRKLVLRMKPGDSLLESDCWDLPALSTLHF---KCYVGYI-SIVKW 668
            P  L    F+  S+R L LR+  G +L +S    LP+L TLH    + + G I S    
Sbjct: 137 VPIVLPRCFFNCESLRSLKLRIDGGIALPKS--LGLPSLKTLHLGGAQNFDGKIFSSCPN 194

Query: 669 VEDKLLEQYLICLPALRDLWLQHWDLQSFAFSLPELTTLLLRICKLPNKVWNLPALKSLT 848
           +E+  +E   ICL  + +  +   +L+S    L    + ++R CK+   +   P L S  
Sbjct: 195 LENLTIED--ICLNTIENFNIHALNLKSLEI-LNWRYSRIMRGCKV---MLFAPKLTSFK 248

Query: 849 LDEVDFPENTRDLFTAVVNLQNL 917
            D          LF + VNL +L
Sbjct: 249 FD------GNTPLFWSEVNLTSL 265



 Score = 67.0 bits (162), Expect = 2e-08
 Identities = 72/232 (31%), Positives = 114/232 (49%), Gaps = 21/232 (9%)
 Frame = +3

Query: 759  FSLPELTTLLLRI---CKLPNKVWNLPALKSLTLDEVDFPENTRDLFTAVVNLQNLTLSY 929
            F+   L +L LRI     LP  +  LP+LK+L L      +    +F++  NL+NLT+  
Sbjct: 146  FNCESLRSLKLRIDGGIALPKSL-GLPSLKTLHLGGAQNFDGK--IFSSCPNLENLTIED 202

Query: 930  NKVTT-HNCFITCPELVNLEIKTLYKHFRGIPKCTIVVFAPKLSNFTSVGIFPITFEE-- 1100
              + T  N  I    L +LEI   +++ R +  C +++FAPKL++F   G  P+ + E  
Sbjct: 203  ICLNTIENFNIHALNLKSLEILN-WRYSRIMRGCKVMLFAPKLTSFKFDGNTPLFWSEVN 261

Query: 1101 -SKLANVNVKLRGW----------TDDKYCSREELKKCYQQFTV----MLPGFGSAKILN 1235
             + L +VNV L+ +           +D+Y S E+  K  Q F +    ML  F SAK L 
Sbjct: 262  LTSLDDVNVVLQRYYYRHDYQFYVDEDEYISGEDETK--QGFCLDLLKMLHQFCSAKSLT 319

Query: 1236 LDLEVIEALLLIFDFLASFSSPFYALKCVKLPHECNEASISNTLRSYLLGGS 1391
            L + +IE L  +   L    SPF  LK +KL  +  + ++   + +Y L  S
Sbjct: 320  LSMNIIEVLSKVPAALNKHPSPFSNLKYLKLKTDHKDVTLPAHVLNYFLSSS 371


>ref|NP_974861.1| FBD-associated F-box protein [Arabidopsis thaliana]
            gi|75262402|sp|Q9FFW2.1|FBD17_ARATH RecName:
            Full=FBD-associated F-box protein At5g38590
            gi|10176827|dbj|BAB10149.1| unnamed protein product
            [Arabidopsis thaliana] gi|332006955|gb|AED94338.1|
            FBD-associated F-box protein [Arabidopsis thaliana]
          Length = 410

 Score = 83.2 bits (204), Expect = 3e-13
 Identities = 100/356 (28%), Positives = 160/356 (44%), Gaps = 37/356 (10%)
 Frame = +3

Query: 183  RISRLPDDLLHRILKFVDTKLGVQTSALSKRWKFVWTTLPFLKFEWDQICAATNTTNLTR 362
            +I+ LPDDLL +IL +V T + V TS LSKRW+F+W  LP L +   + C       L  
Sbjct: 3    KINGLPDDLLVKILSYVPTDIAVSTSILSKRWEFLWMWLPNLDYT-SRWCRKPGDVGLRD 61

Query: 363  HVLNHRN---HQSQ-ISSLEIAYLPTSL----IVKFIEYAISHHVQDLNVQFRSDHKPFK 518
             +  H+N   H++  I SL        +    I ++IE A+S HV DL++   S+++   
Sbjct: 62   FI--HKNLPLHRAPVIESLRFHSNSPDIKPEDIRRWIEIAVSRHVHDLDIDHFSENENIF 119

Query: 519  LSN-FSSNSIRKLVLRMKPGDSLLESDCWDLPALSTLHFKCYVGYISIVKWVEDKLLEQY 695
            LS+ F+  S+  L LR      +    C  LP+L TL        +  V +VE K L++ 
Sbjct: 120  LSSFFACKSLVTLKLRSVTLRDIPSMVC--LPSLKTL-------LLDNVSFVEGKSLQEL 170

Query: 696  LICLPALRDLWL---QHWDLQSFAFSLPELTTLLLRICK--LPNKVW-NLPALKSLTLDE 857
            L   P L DL +    + + +     +P L +L L I    L +  W + P+L+ L L++
Sbjct: 171  LSICPVLEDLSVYCDDYENTKELTIVVPSLLSLSLYIPDEWLLDGYWIDTPSLEYLKLED 230

Query: 858  VDFPENTRDLFTAVVNLQNLTLSYNKVTTHNCFITCPELVNLEIKTLYKH---------- 1007
                 N+ D  + + N+  L  +Y       CF+  P+ V +E  T  KH          
Sbjct: 231  ----WNSCDHLSLIKNMPKLREAY---VDAKCFL--PKSV-IESITSVKHLTICSKDGYG 280

Query: 1008 ----FRGIPKCTIVV--------FAPKLSNFTSVGIFPITFEESKLANVNVKLRGW 1139
                F  +   T+ V            L +  ++ I  I+  E  + +V + L GW
Sbjct: 281  DGFVFNQLEHLTLCVCRGDSPSLLGQLLKDSPNLRILEISVMEDHVDDVGISLDGW 336


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