BLASTX nr result

ID: Angelica23_contig00022541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022541
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...    91   2e-16
ref|XP_003602366.1| RNA-binding protein [Medicago truncatula] gi...    88   2e-15
ref|XP_003602365.1| RNA-binding protein [Medicago truncatula] gi...    88   2e-15
ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi...    88   2e-15
ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    87   3e-15

>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 41/46 (89%), Positives = 44/46 (95%)
 Frame = -3

Query: 653 VSTDSKGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVDKF 516
           VS DS+GTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRV ++
Sbjct: 148 VSRDSEGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVREY 193


>ref|XP_003602366.1| RNA-binding protein [Medicago truncatula]
           gi|355491414|gb|AES72617.1| RNA-binding protein
           [Medicago truncatula]
          Length = 273

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -3

Query: 653 VSTDSKGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVDKF 516
           VS DS+GTFGLVDYTNY+DMKYAIRKLDDTEFRNPW R+YIRV K+
Sbjct: 154 VSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKY 199


>ref|XP_003602365.1| RNA-binding protein [Medicago truncatula]
           gi|355491413|gb|AES72616.1| RNA-binding protein
           [Medicago truncatula]
          Length = 272

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -3

Query: 653 VSTDSKGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVDKF 516
           VS DS+GTFGLVDYTNY+DMKYAIRKLDDTEFRNPW R+YIRV K+
Sbjct: 154 VSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKY 199


>ref|XP_003602364.1| RNA-binding protein [Medicago truncatula]
           gi|355491412|gb|AES72615.1| RNA-binding protein
           [Medicago truncatula]
          Length = 380

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 39/46 (84%), Positives = 43/46 (93%)
 Frame = -3

Query: 653 VSTDSKGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVDKF 516
           VS DS+GTFGLVDYTNY+DMKYAIRKLDDTEFRNPW R+YIRV K+
Sbjct: 261 VSRDSEGTFGLVDYTNYDDMKYAIRKLDDTEFRNPWARSYIRVRKY 306


>ref|XP_004171554.1| PREDICTED: pre-mRNA-splicing factor SF2-like, partial [Cucumis
           sativus]
          Length = 158

 Score = 87.0 bits (214), Expect = 3e-15
 Identities = 38/46 (82%), Positives = 42/46 (91%)
 Frame = -3

Query: 653 VSTDSKGTFGLVDYTNYEDMKYAIRKLDDTEFRNPWTRTYIRVDKF 516
           VS DS+GTFG+VDYTNY+DMKYAIRKLDDTEFRNPW R YIRV K+
Sbjct: 29  VSRDSEGTFGIVDYTNYDDMKYAIRKLDDTEFRNPWARAYIRVKKY 74


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