BLASTX nr result

ID: Angelica23_contig00022517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022517
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinif...   198   1e-48
emb|CBI28700.3| unnamed protein product [Vitis vinifera]              198   1e-48
emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]   198   1e-48
ref|XP_002300839.1| f-box family protein [Populus trichocarpa] g...   191   2e-46
ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|2...   190   3e-46

>ref|XP_002272905.2| PREDICTED: F-box protein SKIP17 [Vitis vinifera]
          Length = 486

 Score =  198 bits (503), Expect = 1e-48
 Identities = 96/143 (67%), Positives = 113/143 (79%)
 Frame = +3

Query: 240 ERAIRLGSVLLEAGKRSARKRGSLHNAVVWPLPADLTIKVFSMLDTQSVCYXXXXXXXXX 419
           +RA+RLGS LLEAGKRSARKR S+HN++ W LP DLTIKVFSMLDTQS+CY         
Sbjct: 80  DRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSMFH 139

Query: 420 XXXLDPMCYSCIDLMTVIPKVNNLVVSTMIQRAGKALRSIKLGLVSGPFASFGSSQPCIY 599
              +DP+CY+ IDL TV+PKVNN VVSTMIQRAGK L+S++LG+V GP  S GSSQP +Y
Sbjct: 140 KCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTLSPGSSQPLVY 199

Query: 600 STRNSTHVSGFSWNDKRSRQGKE 668
           + RNS   +GFSWNDKRSRQGKE
Sbjct: 200 TIRNSVDAAGFSWNDKRSRQGKE 222


>emb|CBI28700.3| unnamed protein product [Vitis vinifera]
          Length = 532

 Score =  198 bits (503), Expect = 1e-48
 Identities = 96/143 (67%), Positives = 113/143 (79%)
 Frame = +3

Query: 240 ERAIRLGSVLLEAGKRSARKRGSLHNAVVWPLPADLTIKVFSMLDTQSVCYXXXXXXXXX 419
           +RA+RLGS LLEAGKRSARKR S+HN++ W LP DLTIKVFSMLDTQS+CY         
Sbjct: 80  DRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSMFH 139

Query: 420 XXXLDPMCYSCIDLMTVIPKVNNLVVSTMIQRAGKALRSIKLGLVSGPFASFGSSQPCIY 599
              +DP+CY+ IDL TV+PKVNN VVSTMIQRAGK L+S++LG+V GP  S GSSQP +Y
Sbjct: 140 KCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTLSPGSSQPLVY 199

Query: 600 STRNSTHVSGFSWNDKRSRQGKE 668
           + RNS   +GFSWNDKRSRQGKE
Sbjct: 200 TIRNSVDAAGFSWNDKRSRQGKE 222


>emb|CAN61447.1| hypothetical protein VITISV_024140 [Vitis vinifera]
          Length = 603

 Score =  198 bits (503), Expect = 1e-48
 Identities = 96/143 (67%), Positives = 113/143 (79%)
 Frame = +3

Query: 240 ERAIRLGSVLLEAGKRSARKRGSLHNAVVWPLPADLTIKVFSMLDTQSVCYXXXXXXXXX 419
           +RA+RLGS LLEAGKRSARKR S+HN++ W LP DLTIKVFSMLDTQS+CY         
Sbjct: 80  DRALRLGSALLEAGKRSARKRASIHNSLTWALPPDLTIKVFSMLDTQSLCYTAATCSMFH 139

Query: 420 XXXLDPMCYSCIDLMTVIPKVNNLVVSTMIQRAGKALRSIKLGLVSGPFASFGSSQPCIY 599
              +DP+CY+ IDL TV+PKVNN VVSTMIQRAGK L+S++LG+V GP  S GSSQP +Y
Sbjct: 140 KCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKVLQSLRLGIVPGPTLSPGSSQPLVY 199

Query: 600 STRNSTHVSGFSWNDKRSRQGKE 668
           + RNS   +GFSWNDKRSRQGKE
Sbjct: 200 TIRNSVDAAGFSWNDKRSRQGKE 222


>ref|XP_002300839.1| f-box family protein [Populus trichocarpa]
           gi|222842565|gb|EEE80112.1| f-box family protein
           [Populus trichocarpa]
          Length = 471

 Score =  191 bits (484), Expect = 2e-46
 Identities = 92/143 (64%), Positives = 111/143 (77%)
 Frame = +3

Query: 240 ERAIRLGSVLLEAGKRSARKRGSLHNAVVWPLPADLTIKVFSMLDTQSVCYXXXXXXXXX 419
           +RA++LGS+LLEAGKRSARKR S+HN++ W LP DLTIKV SMLDTQS+CY         
Sbjct: 64  DRALKLGSLLLEAGKRSARKRSSVHNSLTWALPPDLTIKVLSMLDTQSLCYAAATCSMFY 123

Query: 420 XXXLDPMCYSCIDLMTVIPKVNNLVVSTMIQRAGKALRSIKLGLVSGPFASFGSSQPCIY 599
              +DP+CY+ IDL TV+PKVNN VVSTMIQRAGKAL S+KLG+V GP  S GS QP +Y
Sbjct: 124 KCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKALLSLKLGIVPGPIMSRGSCQPMVY 183

Query: 600 STRNSTHVSGFSWNDKRSRQGKE 668
             +N+  VS FSWNDK++RQGKE
Sbjct: 184 GIQNAVEVSNFSWNDKKTRQGKE 206


>ref|XP_002307587.1| predicted protein [Populus trichocarpa] gi|222857036|gb|EEE94583.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  190 bits (482), Expect = 3e-46
 Identities = 91/143 (63%), Positives = 109/143 (76%)
 Frame = +3

Query: 240 ERAIRLGSVLLEAGKRSARKRGSLHNAVVWPLPADLTIKVFSMLDTQSVCYXXXXXXXXX 419
           +RA++LGS+LLEAG RSARKR S HN++ W LP DLTIK+FSMLD QS+CY         
Sbjct: 79  DRALKLGSLLLEAGNRSARKRSSFHNSLTWALPPDLTIKLFSMLDAQSLCYAAATCSMFY 138

Query: 420 XXXLDPMCYSCIDLMTVIPKVNNLVVSTMIQRAGKALRSIKLGLVSGPFASFGSSQPCIY 599
              +DP+CY+ IDL TV+PKVNN VVSTMIQRAGKALRS+KLG+V GP    GS QP +Y
Sbjct: 139 KCAMDPLCYANIDLTTVVPKVNNAVVSTMIQRAGKALRSLKLGIVPGPTLPHGSCQPLVY 198

Query: 600 STRNSTHVSGFSWNDKRSRQGKE 668
             RN+  VS FSWNDK++RQGKE
Sbjct: 199 GIRNAVEVSNFSWNDKKTRQGKE 221


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