BLASTX nr result

ID: Angelica23_contig00022506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022506
         (770 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320386.1| methyl binding domain protein [Populus trich...   187   2e-45
ref|NP_001239875.1| uncharacterized protein LOC100802350 [Glycin...   183   4e-44
ref|XP_002331766.1| methyl binding domain protein [Populus trich...   181   2e-43
ref|XP_002524794.1| DNA binding protein, putative [Ricinus commu...   181   2e-43
ref|XP_003536387.1| PREDICTED: methyl-CpG-binding domain-contain...   180   3e-43

>ref|XP_002320386.1| methyl binding domain protein [Populus trichocarpa]
           gi|118485542|gb|ABK94623.1| unknown [Populus
           trichocarpa] gi|222861159|gb|EEE98701.1| methyl binding
           domain protein [Populus trichocarpa]
          Length = 182

 Score =  187 bits (476), Expect = 2e-45
 Identities = 81/142 (57%), Positives = 115/142 (80%)
 Frame = +3

Query: 78  YAVQCGKCLKWRKILTQEEFESIRANVTKDPFVCNKKLKVECDDPADIEYDSSRIWVMDK 257
           YA QC KCLKWR I T+EE+E IR+ + + PFVCN+K  V CDDPADIEY+++R WV+D+
Sbjct: 28  YAAQCDKCLKWRVIATEEEYEEIRSKMEESPFVCNRKPGVSCDDPADIEYNATRTWVIDR 87

Query: 258 PDVPKTPPGFHRDVILRKDFSKMDAHYTSPEGKRLRSSVEVATFLEENPKYKKSISVADF 437
           P +PKTP GF R ++LR+DFSKMDA+Y +P GK+LR+  E+A F++ NPKY K ++++DF
Sbjct: 88  PGIPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFIDANPKY-KDVNLSDF 146

Query: 438 SFITPKVVLETVPKDFVRKLST 503
           +F +PKV+ +T+P+D VRK+S+
Sbjct: 147 NFTSPKVMEDTIPEDAVRKVSS 168


>ref|NP_001239875.1| uncharacterized protein LOC100802350 [Glycine max]
           gi|255641529|gb|ACU21038.1| unknown [Glycine max]
          Length = 177

 Score =  183 bits (464), Expect = 4e-44
 Identities = 79/147 (53%), Positives = 115/147 (78%)
 Frame = +3

Query: 75  MYAVQCGKCLKWRKILTQEEFESIRANVTKDPFVCNKKLKVECDDPADIEYDSSRIWVMD 254
           +YA QC  CLKWR+I TQEEFE IR+ VT++PF+C++K    CD+P DIEYDS+R WV+D
Sbjct: 25  IYAAQCKNCLKWREIDTQEEFEEIRSKVTEEPFLCSRKANSSCDEPGDIEYDSTRTWVID 84

Query: 255 KPDVPKTPPGFHRDVILRKDFSKMDAHYTSPEGKRLRSSVEVATFLEENPKYKKSISVAD 434
           KP++PKTP GF R ++LRKD+SK+DA+Y +P GK+LR+  E+A FL++NP++ K +S +D
Sbjct: 85  KPNLPKTPQGFKRSLVLRKDYSKLDAYYITPAGKKLRTRNEIAAFLKDNPEF-KGVSASD 143

Query: 435 FSFITPKVVLETVPKDFVRKLSTEKKI 515
           F F +PK++ +T+P+   +K S  KK+
Sbjct: 144 FDFSSPKIMQDTIPEIIEQKDSANKKV 170


>ref|XP_002331766.1| methyl binding domain protein [Populus trichocarpa]
           gi|224117178|ref|XP_002331767.1| hypothetical protein
           POPTRDRAFT_585558 [Populus trichocarpa]
           gi|222874359|gb|EEF11490.1| methyl binding domain
           protein [Populus trichocarpa]
           gi|222874360|gb|EEF11491.1| hypothetical protein
           POPTRDRAFT_585558 [Populus trichocarpa]
          Length = 182

 Score =  181 bits (459), Expect = 2e-43
 Identities = 82/154 (53%), Positives = 119/154 (77%), Gaps = 5/154 (3%)
 Frame = +3

Query: 78  YAVQCGKCLKWRKILTQEEFESIRANVTKDPFVCNKKLKVECDDPADIEYDSSRIWVMDK 257
           YA QC KCLKWR I T+EE+E IR+ + ++P+VC++K  V CDDPADIEY+++R WV+D+
Sbjct: 28  YAAQCDKCLKWRVIPTEEEYEEIRSKMEENPYVCDRKPGVSCDDPADIEYNATRTWVIDR 87

Query: 258 PDVPKTPPGFHRDVILRKDFSKMDAHYTSPEGKRLRSSVEVATFLEENPKYKKSISVADF 437
           P VPKTP GF R ++LR+DFSKMDA+Y +P GK+LR+  E+A F+E NPKY K ++++ F
Sbjct: 88  PGVPKTPEGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFIEANPKY-KDVNLSAF 146

Query: 438 SFITPKVVLETVPKDFVRKL-----STEKKIVKN 524
           +F +PKV+ +T+P+D VRK+       +KK +K+
Sbjct: 147 NFTSPKVMEDTIPEDAVRKVPSSANGNKKKALKD 180


>ref|XP_002524794.1| DNA binding protein, putative [Ricinus communis]
           gi|223535978|gb|EEF37637.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 160

 Score =  181 bits (458), Expect = 2e-43
 Identities = 80/135 (59%), Positives = 107/135 (79%)
 Frame = +3

Query: 78  YAVQCGKCLKWRKILTQEEFESIRANVTKDPFVCNKKLKVECDDPADIEYDSSRIWVMDK 257
           YA QC KC+KWR I T+EE+E IR+ + ++PF CN+K  + C+DPADIE D+SR WV+DK
Sbjct: 7   YAAQCEKCMKWRVIETEEEYEEIRSKIVENPFYCNRKPGISCEDPADIECDASRTWVIDK 66

Query: 258 PDVPKTPPGFHRDVILRKDFSKMDAHYTSPEGKRLRSSVEVATFLEENPKYKKSISVADF 437
           P +PKTP GF R ++LR+DFSKMDA+Y +P GK+LR+  E+A FLE NPKY K +S+ DF
Sbjct: 67  PGLPKTPGGFKRSLVLRRDFSKMDAYYITPTGKKLRTRNEIAAFLEANPKY-KGVSIEDF 125

Query: 438 SFITPKVVLETVPKD 482
           +F +PKV+ ETVP+D
Sbjct: 126 NFTSPKVMEETVPED 140


>ref|XP_003536387.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
           [Glycine max]
          Length = 193

 Score =  180 bits (457), Expect = 3e-43
 Identities = 78/147 (53%), Positives = 114/147 (77%)
 Frame = +3

Query: 75  MYAVQCGKCLKWRKILTQEEFESIRANVTKDPFVCNKKLKVECDDPADIEYDSSRIWVMD 254
           +YA QC  CLKWR+I TQEEFE IR+ V ++PF+C++K    CD+P DI+YDSSR WV+D
Sbjct: 41  IYAAQCKNCLKWREIDTQEEFEEIRSKVAEEPFLCSRKANSSCDEPGDIKYDSSRTWVID 100

Query: 255 KPDVPKTPPGFHRDVILRKDFSKMDAHYTSPEGKRLRSSVEVATFLEENPKYKKSISVAD 434
           KP++PKTP GF R ++LRKD+SK+DA+Y +P GK+LR+  E+A FL++NP++ K +S +D
Sbjct: 101 KPNLPKTPQGFKRSLVLRKDYSKLDAYYITPAGKKLRTRNEIAAFLKDNPEF-KGVSASD 159

Query: 435 FSFITPKVVLETVPKDFVRKLSTEKKI 515
           F F +PK++ +T+P+   +K S  KK+
Sbjct: 160 FDFSSPKIMQDTIPEVVEQKDSANKKV 186


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