BLASTX nr result

ID: Angelica23_contig00022478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022478
         (840 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39558.3| unnamed protein product [Vitis vinifera]               60   5e-07
ref|XP_002283093.1| PREDICTED: eukaryotic translation initiation...    60   5e-07
ref|XP_003554329.1| PREDICTED: eukaryotic translation initiation...    57   4e-06
ref|XP_004168561.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t...    57   5e-06

>emb|CBI39558.3| unnamed protein product [Vitis vinifera]
          Length = 884

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
 Frame = -3

Query: 463 KISKLGAMLPDLAEAVDKDHVSCLLENQLY--RRERKKKYVVHCY*YL*LRXXXXXXXXX 290
           K SKLG ML  LAE VDK+H   L    +   R+E +++ ++                  
Sbjct: 542 KASKLGDMLSGLAETVDKEHKRLLARKSIIEKRKEEQERQLLE----------------- 584

Query: 289 XXITTVKGLDE*FSFLECEEKLKRFKPQKMTEEAEQRRLASKIEQWRNQRLIDGVCD--- 119
                          +E EE+ KR K QK+TEEAEQ+RLAS+ EQ + QR++  + +   
Sbjct: 585 ---------------MEREEESKRLKLQKITEEAEQKRLASEYEQRKTQRILREIEEREL 629

Query: 118 ---NCFL*SFDRTGGFHN*PILSN*KKVTMQSMTKLAHNEQL 2
                 L   ++         ++  +KVT QS+ +LA +EQL
Sbjct: 630 EEAQALLQEAEKRSKKKGKKPIAEGEKVTKQSLMELALSEQL 671


>ref|XP_002283093.1| PREDICTED: eukaryotic translation initiation factor 3 subunit A
           [Vitis vinifera]
          Length = 977

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 8/162 (4%)
 Frame = -3

Query: 463 KISKLGAMLPDLAEAVDKDHVSCLLENQLY--RRERKKKYVVHCY*YL*LRXXXXXXXXX 290
           K SKLG ML  LAE VDK+H   L    +   R+E +++ ++                  
Sbjct: 542 KASKLGDMLSGLAETVDKEHKRLLARKSIIEKRKEEQERQLLE----------------- 584

Query: 289 XXITTVKGLDE*FSFLECEEKLKRFKPQKMTEEAEQRRLASKIEQWRNQRLIDGVCD--- 119
                          +E EE+ KR K QK+TEEAEQ+RLAS+ EQ + QR++  + +   
Sbjct: 585 ---------------MEREEESKRLKLQKITEEAEQKRLASEYEQRKTQRILREIEEREL 629

Query: 118 ---NCFL*SFDRTGGFHN*PILSN*KKVTMQSMTKLAHNEQL 2
                 L   ++         ++  +KVT QS+ +LA +EQL
Sbjct: 630 EEAQALLQEAEKRSKKKGKKPIAEGEKVTKQSLMELALSEQL 671


>ref|XP_003554329.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
           A-like [Glycine max] gi|47076999|dbj|BAD18434.1| unnamed
           protein product [Homo sapiens]
          Length = 957

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 38/113 (33%), Positives = 57/113 (50%), Gaps = 2/113 (1%)
 Frame = -3

Query: 466 GKISKLGAMLPDLAEAVDKDHVSCLLENQLY--RRERKKKYVVHCY*YL*LRXXXXXXXX 293
           G+ SKLGA+LP L E V K+H   L    +   R+E +++ ++                 
Sbjct: 541 GRPSKLGALLPTLTEVVAKEHKRLLARKSIIEKRKEEQERQLLE---------------- 584

Query: 292 XXXITTVKGLDE*FSFLECEEKLKRFKPQKMTEEAEQRRLASKIEQWRNQRLI 134
                           +E EE+ KR + QK+TEEAEQRRLA++ EQ +NQR++
Sbjct: 585 ----------------MEREEESKRLRLQKITEEAEQRRLATEYEQRKNQRIL 621


>ref|XP_004168561.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
           factor 3 subunit A-like, partial [Cucumis sativus]
          Length = 935

 Score = 57.0 bits (136), Expect = 5e-06
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
 Frame = -3

Query: 463 KISKLGAMLPDLAEAVDKDHVSCLLENQLY--RRERKKKYVVHCY*YL*LRXXXXXXXXX 290
           K SK G +LPDLA+ VDK+H   L    +   R+E +++ ++                  
Sbjct: 507 KASKTGDILPDLADIVDKEHKRLLARKSIIEKRKEEQERQLLE----------------- 549

Query: 289 XXITTVKGLDE*FSFLECEEKLKRFKPQKMTEEAEQRRLASKIEQWRNQRL 137
                          +E EE+ +R K QK+TEEAEQ+RLA++ EQ +NQR+
Sbjct: 550 ---------------MEREEESRRLKLQKITEEAEQKRLAAEYEQXKNQRI 585


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