BLASTX nr result

ID: Angelica23_contig00022447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022447
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    60   2e-07
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    58   7e-07

>ref|XP_002322522.1| predicted protein [Populus trichocarpa] gi|222867152|gb|EEF04283.1|
           predicted protein [Populus trichocarpa]
          Length = 419

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 6/76 (7%)
 Frame = +3

Query: 3   KLMWYDPKRKRAKNVRIRGIPNNFYSYLYTESLLQLAED-----KPLQKPSQDKQLMK-Q 164
           KL+WYD K K AK V+IRG PN++ S +Y ESL+++ +      K  Q+  ++++  K  
Sbjct: 344 KLVWYDWKNKHAKVVKIRGGPNSYGSEMYVESLVRINDGDRNGWKKQQEIDEEEEKRKAD 403

Query: 165 QKKRDDFLSRGFSLKL 212
           +KKRD+FLS GF LKL
Sbjct: 404 RKKRDNFLSVGFKLKL 419


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/69 (43%), Positives = 42/69 (60%)
 Frame = +3

Query: 6   LMWYDPKRKRAKNVRIRGIPNNFYSYLYTESLLQLAEDKPLQKPSQDKQLMKQQKKRDDF 185
           L WYD KRK   NV I+G+P  F + +   SL+ L  ++  ++P  + +  K +KKRDDF
Sbjct: 321 LFWYDLKRKEVVNVWIQGVPITFEAEICVGSLVPLNANRLRRRPKHEHKETKNRKKRDDF 380

Query: 186 LSRGFSLKL 212
           LS GF L L
Sbjct: 381 LSEGFKLVL 389


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 33/70 (47%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
 Frame = +3

Query: 6   LMWYDPKRKRAKNVRIRGIPNNFYSYLYTESLLQLAEDKPLQKPSQDK-QLMKQQKKRDD 182
           L WYD KRK+ KN RI GIP +F +  + ESL+ ++ ++ L   +QD  +  K + KRDD
Sbjct: 328 LCWYDLKRKQVKN-RIPGIPYSFEADTFVESLISVSPNRHLDGRTQDDDEDSKDRNKRDD 386

Query: 183 FLSRGFSLKL 212
           FLS GF L L
Sbjct: 387 FLSEGFKLVL 396


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