BLASTX nr result

ID: Angelica23_contig00022427 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022427
         (1173 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|2...   191   4e-46
ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|2...   189   1e-45
ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|2...   187   3e-45
ref|XP_002271242.1| PREDICTED: structure-specific endonuclease s...   187   4e-45
ref|XP_003533500.1| PREDICTED: structure-specific endonuclease s...   187   6e-45

>ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|222845668|gb|EEE83215.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  191 bits (484), Expect = 4e-46
 Identities = 103/173 (59%), Positives = 113/173 (65%), Gaps = 9/173 (5%)
 Frame = +3

Query: 6   MVRLVSQTFRSIK---------PHNTVASKSEPAVVXXXXXXXXXXXXXXASWCVYLILS 158
           M RL+S+TFRS+K         P     S S                    SW VYLILS
Sbjct: 1   MTRLLSKTFRSVKLKASSSKPPPPQQQPSPSSSLPRSRKTRAKSSSNSKSRSWSVYLILS 60

Query: 159 TNVPIKTYVGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFESK 338
           TN PIKTYVGVT NFSRRLKQHNGELKGGAKASRAGRPW+CAC+I+GF D+S+AC FESK
Sbjct: 61  TNRPIKTYVGVTTNFSRRLKQHNGELKGGAKASRAGRPWICACIIRGFNDRSEACKFESK 120

Query: 339 WKICSRKLPRKEKLQRQDQHIENDPLPLLRHRHTALDRVKGLIDCSHLEIVWK 497
           WKI SRKLPRK     Q +    D   LL+HR TALDRVKG  D SHLEI WK
Sbjct: 121 WKIFSRKLPRKRIDDDQMKQSSKDSHRLLQHRKTALDRVKGSFDLSHLEIDWK 173


>ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|222845645|gb|EEE83192.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  189 bits (480), Expect = 1e-45
 Identities = 102/174 (58%), Positives = 111/174 (63%), Gaps = 10/174 (5%)
 Frame = +3

Query: 6   MVRLVSQTFRSIK----------PHNTVASKSEPAVVXXXXXXXXXXXXXXASWCVYLIL 155
           M RL+SQTFRS+K          P     S S                    SW VYLIL
Sbjct: 1   MTRLLSQTFRSVKLKASSSKPPPPQQQQPSSSSSLPRSRKTRAKSSSNSKSRSWSVYLIL 60

Query: 156 STNVPIKTYVGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFES 335
           STN PIKTYVGVT NFSRRLKQHNGELKGGAKASRAGRPW+CAC+I+GF D+S+AC FES
Sbjct: 61  STNHPIKTYVGVTTNFSRRLKQHNGELKGGAKASRAGRPWICACIIRGFNDRSEACKFES 120

Query: 336 KWKICSRKLPRKEKLQRQDQHIENDPLPLLRHRHTALDRVKGLIDCSHLEIVWK 497
           KWK  SRK PRK     Q +    D   LL+HR TALDRVKG  D SHLEI WK
Sbjct: 121 KWKSFSRKFPRKRIDDDQMKQSRKDSHRLLQHRKTALDRVKGSFDLSHLEIDWK 174


>ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|222845648|gb|EEE83195.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  187 bits (476), Expect = 3e-45
 Identities = 101/174 (58%), Positives = 111/174 (63%), Gaps = 10/174 (5%)
 Frame = +3

Query: 6   MVRLVSQTFRSIK----------PHNTVASKSEPAVVXXXXXXXXXXXXXXASWCVYLIL 155
           M RL+SQTFRS+K          P     S S                    SW VYLIL
Sbjct: 1   MTRLLSQTFRSVKLKASSSKPPPPQQQQPSSSSSLPRSRKTRAKSSSNSKSRSWSVYLIL 60

Query: 156 STNVPIKTYVGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFES 335
           STN PIKTYVGVT NFSRRLKQHNG+LKGGAKASRAGRPW+CAC+I+GF D+S+AC FES
Sbjct: 61  STNHPIKTYVGVTTNFSRRLKQHNGKLKGGAKASRAGRPWICACIIRGFNDRSEACKFES 120

Query: 336 KWKICSRKLPRKEKLQRQDQHIENDPLPLLRHRHTALDRVKGLIDCSHLEIVWK 497
           KWK  SRK PRK     Q +    D   LL+HR TALDRVKG  D SHLEI WK
Sbjct: 121 KWKSFSRKFPRKRIDDDQMKQSRKDSHRLLQHRKTALDRVKGSFDLSHLEIDWK 174


>ref|XP_002271242.1| PREDICTED: structure-specific endonuclease subunit slx1 [Vitis
           vinifera] gi|296085104|emb|CBI28599.3| unnamed protein
           product [Vitis vinifera]
          Length = 160

 Score =  187 bits (475), Expect = 4e-45
 Identities = 106/170 (62%), Positives = 119/170 (70%), Gaps = 6/170 (3%)
 Frame = +3

Query: 6   MVRLVSQTFRSIK---PH-NTVASKSEPAVVXXXXXXXXXXXXXXASWCVYLILSTNVPI 173
           MVR +S+ FRSIK   P+ N   SKS P+                 SW VYLILSTN PI
Sbjct: 1   MVR-ISKIFRSIKCSNPNPNPDPSKSSPS---------SSRSRSSFSWLVYLILSTNTPI 50

Query: 174 KTYVGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFESKWKICS 353
           KTYVGVT NFSRRLKQHNGELKGGAKASR GRPWVCAC+IQGF DKS+AC FESKWK  S
Sbjct: 51  KTYVGVTTNFSRRLKQHNGELKGGAKASRTGRPWVCACIIQGFKDKSEACQFESKWKSFS 110

Query: 354 RKLPRKEKLQRQD--QHIENDPLPLLRHRHTALDRVKGLIDCSHLEIVWK 497
           RKLPRK    R D  + ++ND L LL+HR  AL+RVKG + C HLEI W+
Sbjct: 111 RKLPRK----RNDTVRQVDNDSLLLLQHREAALNRVKGSLVCDHLEINWQ 156


>ref|XP_003533500.1| PREDICTED: structure-specific endonuclease subunit slx1-like
           [Glycine max]
          Length = 172

 Score =  187 bits (474), Expect = 6e-45
 Identities = 95/167 (56%), Positives = 114/167 (68%), Gaps = 5/167 (2%)
 Frame = +3

Query: 18  VSQTFRSIKPHNT---VASKSEP--AVVXXXXXXXXXXXXXXASWCVYLILSTNVPIKTY 182
           +S  FRSIK  N+   ++  S P  + +               SW VYLILSTN PIKTY
Sbjct: 4   LSTQFRSIKRPNSNPKLSKSSSPTKSEIKFNAKPKPKSESESESWSVYLILSTNHPIKTY 63

Query: 183 VGVTNNFSRRLKQHNGELKGGAKASRAGRPWVCACLIQGFMDKSKACAFESKWKICSRKL 362
           VG+TNNF RRLKQHNGELKGGAKASRAGRPW+CAC+I GF D+S+A  FESKWK  SR+ 
Sbjct: 64  VGITNNFPRRLKQHNGELKGGAKASRAGRPWICACIICGFTDRSEASVFESKWKTFSRRA 123

Query: 363 PRKEKLQRQDQHIENDPLPLLRHRHTALDRVKGLIDCSHLEIVWKHD 503
           PRK +     +  E+  LPLLRHR  AL+RVKG +DC+HLEI+W  D
Sbjct: 124 PRKNQNDNLSKQSEDSSLPLLRHRQAALNRVKGSLDCAHLEIIWHLD 170


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