BLASTX nr result

ID: Angelica23_contig00022415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022415
         (415 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containi...   237   6e-61
emb|CBI29931.3| unnamed protein product [Vitis vinifera]              237   6e-61
ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|2...   236   2e-60
ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containi...   221   5e-56
ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   219   2e-55

>ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 989

 Score =  237 bits (605), Expect = 6e-61
 Identities = 107/138 (77%), Positives = 127/138 (92%)
 Frame = -2

Query: 414  TRQLMKNRGVKKEPGRSWIEVKNSVHAFFVGDRLHPLAGKIYEHLDDLNRRATAVGYVQD 235
            TRQ+MK+RGVKKEPGRSWIEVKNS+HAFFVGDRLHPLA +IYE++DDLN RA  +GYVQD
Sbjct: 842  TRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQD 901

Query: 234  RISLWNDIEQGQKDPTTYIHSEKLAITFGLLSLSDTIPLRVMKNLRVCNDCHNWIKCVSK 55
            R +L ND+EQ QKDPT YIHSEKLA+ FGLLSL++T+P+RV+KNLRVCNDCHNWIK VSK
Sbjct: 902  RYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSK 961

Query: 54   VTNRSIIVRGSYRFHHFE 1
            ++NR+I+VR +YRFHHFE
Sbjct: 962  ISNRAIVVRDAYRFHHFE 979


>emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  237 bits (605), Expect = 6e-61
 Identities = 107/138 (77%), Positives = 127/138 (92%)
 Frame = -2

Query: 414  TRQLMKNRGVKKEPGRSWIEVKNSVHAFFVGDRLHPLAGKIYEHLDDLNRRATAVGYVQD 235
            TRQ+MK+RGVKKEPGRSWIEVKNS+HAFFVGDRLHPLA +IYE++DDLN RA  +GYVQD
Sbjct: 691  TRQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQD 750

Query: 234  RISLWNDIEQGQKDPTTYIHSEKLAITFGLLSLSDTIPLRVMKNLRVCNDCHNWIKCVSK 55
            R +L ND+EQ QKDPT YIHSEKLA+ FGLLSL++T+P+RV+KNLRVCNDCHNWIK VSK
Sbjct: 751  RYNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSK 810

Query: 54   VTNRSIIVRGSYRFHHFE 1
            ++NR+I+VR +YRFHHFE
Sbjct: 811  ISNRAIVVRDAYRFHHFE 828


>ref|XP_002319164.1| predicted protein [Populus trichocarpa] gi|222857540|gb|EEE95087.1|
            predicted protein [Populus trichocarpa]
          Length = 989

 Score =  236 bits (601), Expect = 2e-60
 Identities = 109/138 (78%), Positives = 124/138 (89%)
 Frame = -2

Query: 414  TRQLMKNRGVKKEPGRSWIEVKNSVHAFFVGDRLHPLAGKIYEHLDDLNRRATAVGYVQD 235
            TRQ+M+NRGVKKEPGRSWIEVKNSVHAF+VGDRLHPLA KIYE L +LN++A  +GY QD
Sbjct: 842  TRQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQD 901

Query: 234  RISLWNDIEQGQKDPTTYIHSEKLAITFGLLSLSDTIPLRVMKNLRVCNDCHNWIKCVSK 55
            R SL ND+EQ QKDPT YIHSEKLAITFGLLSLSDT+P+ VMKNLRVC DCH+WIK VSK
Sbjct: 902  RYSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSK 961

Query: 54   VTNRSIIVRGSYRFHHFE 1
            ++NR+IIVR +YRFHHFE
Sbjct: 962  ISNRAIIVRDAYRFHHFE 979


>ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  221 bits (563), Expect = 5e-56
 Identities = 100/138 (72%), Positives = 121/138 (87%)
 Frame = -2

Query: 414  TRQLMKNRGVKKEPGRSWIEVKNSVHAFFVGDRLHPLAGKIYEHLDDLNRRATAVGYVQD 235
            +R+LMK+RGVKKEPGRSWIEVKN+VHAF+ GD+LHPL  +IYE++  LNRR + +GYVQD
Sbjct: 890  SRKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQD 949

Query: 234  RISLWNDIEQGQKDPTTYIHSEKLAITFGLLSLSDTIPLRVMKNLRVCNDCHNWIKCVSK 55
              SL N+ EQGQKDP T++HSEKLAI FGLLSL + IP+RVMKNLRVCNDCHNWIK VSK
Sbjct: 950  SFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSK 1009

Query: 54   VTNRSIIVRGSYRFHHFE 1
            ++NRSIIVR ++RFHHF+
Sbjct: 1010 ISNRSIIVRDAHRFHHFD 1027


>ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  219 bits (557), Expect = 2e-55
 Identities = 99/138 (71%), Positives = 120/138 (86%)
 Frame = -2

Query: 414  TRQLMKNRGVKKEPGRSWIEVKNSVHAFFVGDRLHPLAGKIYEHLDDLNRRATAVGYVQD 235
            +R+LMK+ GVKKEPGRSWIEVKN+VHAF+ GD+LHPL  +IYE++  LNRR + +GYVQD
Sbjct: 890  SRKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQD 949

Query: 234  RISLWNDIEQGQKDPTTYIHSEKLAITFGLLSLSDTIPLRVMKNLRVCNDCHNWIKCVSK 55
              SL N+ EQGQKDP T++HSEKLAI FGLLSL + IP+RVMKNLRVCNDCHNWIK VSK
Sbjct: 950  SFSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSK 1009

Query: 54   VTNRSIIVRGSYRFHHFE 1
            ++NRSIIVR ++RFHHF+
Sbjct: 1010 ISNRSIIVRDAHRFHHFD 1027


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