BLASTX nr result

ID: Angelica23_contig00022409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Angelica23_contig00022409
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...    53   3e-10
emb|CBI18084.3| unnamed protein product [Vitis vinifera]               53   3e-10
ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat...    52   2e-06
ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat...    52   2e-06

>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score = 52.8 bits (125), Expect(2) = 3e-10
 Identities = 22/41 (53%), Positives = 30/41 (73%)
 Frame = -1

Query: 126 LDQDN*LINMFLKSTFSFSNQSYARLVFNQTHQPNVFLWNT 4
           L  DN L+NM L+ +F FS+ +Y R +F+Q  QPN+FLWNT
Sbjct: 42  LCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNT 82



 Score = 36.6 bits (83), Expect(2) = 3e-10
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = -3

Query: 211 MKVKPEGVRDFNSFRHLKQVHTRLLRFGL 125
           +++K   ++ FNSF+HLK +H  LLRFGL
Sbjct: 14  LEIKKLILQGFNSFKHLKHLHAHLLRFGL 42


>emb|CBI18084.3| unnamed protein product [Vitis vinifera]
          Length = 496

 Score = 52.8 bits (125), Expect(2) = 3e-10
 Identities = 22/41 (53%), Positives = 30/41 (73%)
 Frame = -1

Query: 126 LDQDN*LINMFLKSTFSFSNQSYARLVFNQTHQPNVFLWNT 4
           L  DN L+NM L+ +F FS+ +Y R +F+Q  QPN+FLWNT
Sbjct: 42  LCHDNYLLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNT 82



 Score = 36.6 bits (83), Expect(2) = 3e-10
 Identities = 15/29 (51%), Positives = 22/29 (75%)
 Frame = -3

Query: 211 MKVKPEGVRDFNSFRHLKQVHTRLLRFGL 125
           +++K   ++ FNSF+HLK +H  LLRFGL
Sbjct: 14  LEIKKLILQGFNSFKHLKHLHAHLLRFGL 42


>ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score = 52.4 bits (124), Expect(2) = 2e-06
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = -1

Query: 132 LVLDQDN*LINMFLKSTFSFSNQSYARLVFNQTHQPNVFLWNT 4
           L LDQDN L+N+ L     F + +Y++LVF+Q  +PN+FLWNT
Sbjct: 42  LHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNT 84



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 178 NSFRHLKQVHTRLLRFGL 125
           N F  LK +H RLLR  L
Sbjct: 27  NFFNQLKHIHARLLRLHL 44


>ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score = 52.4 bits (124), Expect(2) = 2e-06
 Identities = 22/43 (51%), Positives = 31/43 (72%)
 Frame = -1

Query: 132 LVLDQDN*LINMFLKSTFSFSNQSYARLVFNQTHQPNVFLWNT 4
           L LDQDN L+N+ L     F + +Y++LVF+Q  +PN+FLWNT
Sbjct: 42  LHLDQDNYLLNLILCCALDFGSTNYSKLVFSQVKEPNIFLWNT 84



 Score = 23.9 bits (50), Expect(2) = 2e-06
 Identities = 10/18 (55%), Positives = 11/18 (61%)
 Frame = -3

Query: 178 NSFRHLKQVHTRLLRFGL 125
           N F  LK +H RLLR  L
Sbjct: 27  NFFNQLKHIHARLLRLHL 44


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